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H6SR69 (H6SR69_RHOPH) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL CCG09791.1
Gene names
Name:cbbM EMBL CCG09791.1
ORF Names:RSPPHO_03165 EMBL CCG09791.1
OrganismRhodospirillum photometricum DSM 122 EMBL CCG09791.1
Taxonomic identifier1150469 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeRhodospirillum

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL CCG09791.1
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H6SR69 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 3BA0F62EF8408C85

FASTA45749,269
        10         20         30         40         50         60 
MDQSARYVNL DLKEDALIAG GQHVLCAYIM RPKAGYGFVE TAAHFAAESS TGTNVEVCTT 

        70         80         90        100        110        120 
DDFTKGVDAL VYEVDEASEL MKIAYPIDLF DRNITDGKAM IASFLTLTIG NNQGMGDVEY 

       130        140        150        160        170        180 
AKMHDFYVPP AYLSLFDGPS VNIGALWKVL GRPEVNGGLV VGTIIKPKLG LRPQPFAAAC 

       190        200        210        220        230        240 
EAFWRGGDFI KNDEPQGNQP FAPFKETIRL VADAMARVQD ETGQAKLFSA NITADDPFEI 

       250        260        270        280        290        300 
IARGEYVLET FGANAGHVAL LVDGYVAGPT AVTTARRRFP NTFLHYHRAG HGAVTSPQSK 

       310        320        330        340        350        360 
RGYTAFVLSK MARLQGASGI HTGTMGFGKM EGDPSDRAMA FMLEQDVAQG PYYKQAWDGM 

       370        380        390        400        410        420 
KACTPIISGG MNAIRLPGFF ANLGHANVIQ TSGGGCFGHL DGPAAGARSL RQAWEAWSQG 

       430        440        450 
VDLVTYAKEH RELARALESF QADANARYPG WQAALGL 

« Hide

References

[1]"Shotgun genome sequence of Phaeospirillum photometricum DSM 122."
Duquesne K., Sturgis J.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 122 EMBL CCG09791.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE663493 Genomic DNA. Translation: CCG09791.1.
RefSeqYP_005418761.1. NC_017059.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCG09791; CCG09791; RSPPHO_03165.
GeneID12210578.
KEGGrpm:RSPPHO_03165.

Phylogenomic databases

KOK01601.

Enzyme and pathway databases

BioCycRPHO1150469:GLJ6-3310-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6SR69_RHOPH
AccessionPrimary (citable) accession number: H6SR69
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: January 22, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)