Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Rhodospirillum photometricum DSM 122 draft genome sequence

Gene

RSPPHO_02788

Organism
Rhodospirillum photometricum DSM 122
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPHO1150469:GLJ6-2924-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Rhodospirillum photometricum DSM 122 draft genome sequenceImported (EC:4.1.1.39Imported)
Gene namesi
ORF Names:RSPPHO_02788Imported
OrganismiRhodospirillum photometricum DSM 122Imported
Taxonomic identifieri1150469 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeRhodospirillum

Structurei

3D structure databases

ProteinModelPortaliH6SP89.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

H6SP89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLGMTSRIT AIYHVTATAA TIESRAQGIA VEQSVEMPLA AIDDPRVLEE
60 70 80 90 100
IVGQVQSITD LGQGVYEVRI GLAVETTGLE AGQLINMLYG NTSIQDDTVL
110 120 130 140 150
WDAEFPEEVF AAFKGPNVGL EGLRADKAPG RAMTCGALKP QGLPVARLAD
160 170 180 190 200
LARRFADAGP DFIKDDHGHA DQAFSPYAER VPAIARAVRE SNARTGFKTR
210 220 230 240 250
YLPSLNGNLD QMRAQIRLGQ AEGLDTFMIA PMIAGFSTFH TLVRENPTTA
260 270 280 290 300
FFSHPTMTGA SRIAPAFLHG KLFRLLGADA VIYTNHGGRF GFTRETCRAI
310 320 330 340 350
ARNATKPWGG LKGAVPVPAG GMTQDRVPEM VECYGADVIL LIGGGLLLAR
360 370
ERLTEETRAF VEAVAALPAP PGPGAEEVA
Length:379
Mass (Da):40,428
Last modified:April 18, 2012 - v1
Checksum:i0BB1B7DF8BB4E224
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE663493 Genomic DNA. Translation: CCG09414.1.
RefSeqiYP_005418384.1. NC_017059.1.

Genome annotation databases

EnsemblBacteriaiCCG09414; CCG09414; RSPPHO_02788.
KEGGirpm:RSPPHO_02788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE663493 Genomic DNA. Translation: CCG09414.1.
RefSeqiYP_005418384.1. NC_017059.1.

3D structure databases

ProteinModelPortaliH6SP89.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCG09414; CCG09414; RSPPHO_02788.
KEGGirpm:RSPPHO_02788.

Phylogenomic databases

KOiK01601.

Enzyme and pathway databases

BioCyciRPHO1150469:GLJ6-2924-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Shotgun genome sequence of Phaeospirillum photometricum DSM 122."
    Duquesne K., Sturgis J.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 122Imported.

Entry informationi

Entry nameiH6SP89_RHOPH
AccessioniPrimary (citable) accession number: H6SP89
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 29, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.