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Protein
Submitted name:

DNA polymerase LigD, polymerase domain

Gene

BLASA_3263

Organism
Blastococcus saxobsidens (strain DD2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciBSAX1146883:GL9E-3172-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domainImported
Gene namesi
Ordered Locus Names:BLASA_3263Imported
OrganismiBlastococcus saxobsidens (strain DD2)Imported
Taxonomic identifieri1146883 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaGeodermatophilalesGeodermatophilaceaeBlastococcus
ProteomesiUP000007517 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

OMAiTLERWPG.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H6RR51-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSKDAVVL DVDGHEVRVS NPEKPYFPER GIRKIDVVEY FVAVGEGILF
60 70 80 90 100
ALEDRPTTLE RWPGGVVEGA RISTRTDNTG DAFYQKRVPK NAPPWVPTAH
110 120 130 140 150
ITFPSGRTAD EIAPDSVAVV AWCANLGTLT FHPWPVDRTD VESPNQIRID
160 170 180 190 200
LDPQPGTDFA DAVRVAPHVR ELLHEFGMQG WPKTSGGRGV HIYVPIQPRW
210 220 230 240 250
TFSEVRRAVI AFGRELERRL PDHVTMSWWK EERGEKIFLD YNQMARDRTI
260 270 280 290 300
ASAYSIRPKP HAPVSAPVDW DELPDVSPFD FDVLTMPTRF REVGDKHAGL
310 320 330 340 350
AEHAFGIEPL LELAEKQETD AGLGDLPYPP DYPKMPGEPM RVQPSRARRP

TSEES
Length:355
Mass (Da):39,915
Last modified:April 18, 2012 - v1
Checksum:i0509B814DD150933
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO117623 Genomic DNA. Translation: CCG04131.1.
RefSeqiWP_014377010.1. NC_016943.1.

Genome annotation databases

EnsemblBacteriaiCCG04131; CCG04131; BLASA_3263.
KEGGibsd:BLASA_3263.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO117623 Genomic DNA. Translation: CCG04131.1.
RefSeqiWP_014377010.1. NC_016943.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCG04131; CCG04131; BLASA_3263.
KEGGibsd:BLASA_3263.

Phylogenomic databases

OMAiTLERWPG.

Enzyme and pathway databases

BioCyciBSAX1146883:GL9E-3172-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Blastococcus saxobsidens strain DD2."
    Genoscope.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DD2Imported.

Entry informationi

Entry nameiH6RR51_BLASD
AccessioniPrimary (citable) accession number: H6RR51
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: July 22, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.