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Protein
Submitted name:

DNA polymerase LigD, polymerase domain

Gene

BLASA_3097

Organism
Blastococcus saxobsidens (strain DD2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSAX1146883:GL9E-3006-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domainImported
Gene namesi
Ordered Locus Names:BLASA_3097Imported
OrganismiBlastococcus saxobsidens (strain DD2)Imported
Taxonomic identifieri1146883 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaGeodermatophilalesGeodermatophilaceaeBlastococcus
ProteomesiUP000007517 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiKIFIDWS.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

H6RPA8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVDGRQLEV SNLDKVLFPE VSFTKAQVID YYVRIAPVLL PHLSGRPVTF
60 70 80 90 100
TRWPDGVEGQ AFFEKNSARH APEWVRKVTV PSPGSSKGRE TLEMVILETV
110 120 130 140 150
ADLAWAANLA ALELHVPQWQ VGSTRQPALP DLLVLDLDPG PHTGITECCH
160 170 180 190 200
LAERLRVRLV DDGLDPVVKT SGSKGMQVYA PIRVGDRDHP SRYAKKLAQA
210 220 230 240 250
LTAETPDQVV WRMEKALRPG KVLVDWSQNN TAKTTVAPYS LRARPDATVS
260 270 280 290 300
TPIGWDEVDA VRDGADPGSL RFRTEEVLER VEEWGDLFDI ADRRRARLPQ

G
Length:301
Mass (Da):33,564
Last modified:April 18, 2012 - v1
Checksum:i80C930CB520A9FB2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO117623 Genomic DNA. Translation: CCG03967.1.

Genome annotation databases

EnsemblBacteriaiCCG03967; CCG03967; BLASA_3097.
KEGGibsd:BLASA_3097.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO117623 Genomic DNA. Translation: CCG03967.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCG03967; CCG03967; BLASA_3097.
KEGGibsd:BLASA_3097.

Phylogenomic databases

KOiK01971.
OMAiKIFIDWS.

Enzyme and pathway databases

BioCyciBSAX1146883:GL9E-3006-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Blastococcus saxobsidens strain DD2."
    Genoscope.
    Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DD2Imported.

Entry informationi

Entry nameiH6RPA8_BLASD
AccessioniPrimary (citable) accession number: H6RPA8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: July 22, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.