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H6RMT6 (H6RMT6_BLASD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufB EMBL CCG05124.1
Synonyms:tuf HAMAP-Rule MF_00118
Ordered Locus Names:BLASA_4300 EMBL CCG05124.1
OrganismBlastococcus saxobsidens (strain DD2) [Complete proteome] [HAMAP] EMBL CCG05124.1
Taxonomic identifier1146883 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeGeodermatophilaceaeBlastococcus

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding83 – 875GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding138 – 1414GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
H6RMT6 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 46EB0532178EA4EF

FASTA39743,681
        10         20         30         40         50         60 
MAKAKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHDKY PNLNEASAFD QIDKAPEEKA 

        70         80         90        100        110        120 
RGITISIAHV EYQTENRHYA HVDCPGHADY IKNMITGAAQ MDGAILVVAA TDGPMPQTKE 

       130        140        150        160        170        180 
HVLLARQVGV PYIVVALNKA DMVDDEEILE LVELEVRELL SEYEFPGDDV PVVRVSALKA 

       190        200        210        220        230        240 
LEGDAEWGDK LMELMNAVDT AIPEPEREID KPFLMPVEDV FTITGRGTVV TGRVERGIVK 

       250        260        270        280        290        300 
VSEEIEIVGI REGSTKTTVT GVEMFRKLLD QGQAGDNVGL LLRGIKREDV ERGQVVVKPG 

       310        320        330        340        350        360 
SITPHTNFEG SVYILSKDEG GRHTPFFNNY RPQFYFRTTD VTGVVTLPAG TEMVMPGDNT 

       370        380        390 
EMTVELIQPI AMEEGLRFAI REGGRTVGAG RVVKINK 

« Hide

References

[1]"Complete genome sequence of Blastococcus saxobsidens strain DD2."
Genoscope.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DD2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO117623 Genomic DNA. Translation: CCG05124.1.
RefSeqYP_005331150.1. NC_016943.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCG05124; CCG05124; BLASA_4300.
GeneID11919865.
KEGGbsd:BLASA_4300.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.
OMAVTPHTEF.

Enzyme and pathway databases

BioCycBSAX1146883:GL9E-4174-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6RMT6_BLASD
AccessionPrimary (citable) accession number: H6RMT6
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)