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H6QJD6 (H6QJD6_RICMA) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA polymerase III subunit beta PIRNR PIRNR000804
EC=2.7.7.7 PIRNR PIRNR000804
Gene names
ORF Names:RMB_05115 EMBL AFB31786.1
OrganismRickettsia massiliae str. AZT80 EMBL AFB31786.1
Taxonomic identifier1105112 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group ›

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA By similarity. PIRNR PIRNR000804 SAAS SAAS022637

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). PIRNR PIRNR000804 SAAS SAAS022637

Subcellular location

Cytoplasm By similarity PIRNR PIRNR000804.

Sequences

Sequence LengthMass (Da)Tools
H6QJD6 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: CF47B12A4CFE61E9

FASTA37942,316
        10         20         30         40         50         60 
MLKLIVETKT LVQSLGFASS VVEKRNVIPE YANIKLSAKD GNLELSSTNM DLYLSQKIAV 

        70         80         90        100        110        120 
QVVSEGEFTV STKTLNDIVR KLPDSELTLT DRGTTGLEIK GKNCKFNLFT LPVSSFPAMD 

       130        140        150        160        170        180 
SINPEASFKI SCTDFAKIIE STKFSISLDE TRYNLNGVYL HIKDKEFCSA STDGHRLSIS 

       190        200        210        220        230        240 
WVTLEKQIKN FGVILPQKSA EEILKIVKDP KNINEDIEIL LSSNKIKFIC NENTIMLSKL 

       250        260        270        280        290        300 
IDGTFPDYSA FIPESSSSKL VINRKIFADS IERIAIITVE KFRAVKLSLS RETLEISAVG 

       310        320        330        340        350        360 
EARGNAKEVI NSSQDKESFY EYNSDESLAI GFNPQYLEDV LKAVKSDLVE LYFSDVSAPV 

       370 
LIKFPENPKD IFVVMPVKV

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References

[1]Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AZT80 EMBL AFB31786.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003319 Genomic DNA. Translation: AFB31786.1.
RefSeqYP_005302246.1. NC_016931.1.

3D structure databases

ProteinModelPortalH6QJD6.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFB31786; AFB31786; RMB_05115.
GeneID11894427.
KEGGrmi:RMB_05115.

Phylogenomic databases

KOK02338.

Enzyme and pathway databases

BioCycRMAS1105112:GLJ9-848-MONOMER.

Family and domain databases

InterProIPR001001. DNA_polIII_beta.
IPR022635. DNA_polIII_beta_C.
IPR022637. DNA_polIII_beta_cen.
IPR022634. DNA_polIII_beta_N.
[Graphical view]
PfamPF00712. DNA_pol3_beta. 1 hit.
PF02767. DNA_pol3_beta_2. 1 hit.
PF02768. DNA_pol3_beta_3. 1 hit.
[Graphical view]
PIRSFPIRSF000804. DNA_pol_III_b. 1 hit.
SMARTSM00480. POL3Bc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00663. dnan. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH6QJD6_RICMA
AccessionPrimary (citable) accession number: H6QJD6
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: May 29, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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