H6QEY7 (H6QEY7_RICRI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20 RuleBase RU000560 HAMAP-Rule MF_00382

Gene names

Name:	rplT HAMAP-Rule MF_00382 EMBL AFB30560.1
ORF Names:	RPM_05180 EMBL AFB30560.1

Organism

Rickettsia rickettsii str. Hauke EMBL AFB30560.1

Taxonomic identifier

1105103 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia rickettsii

Protein attributes

Sequence length	117 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. RuleBase RU000560 HAMAP-Rule MF_00382
Sequence similarities	Belongs to the ribosomal protein L20P family. RuleBase RU000560 HAMAP-Rule MF_00382

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding RuleBase RU000560 HAMAP-Rule MF_00382
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000560 HAMAP-Rule MF_00382 EMBL AFB30560.1
Gene Ontology (GO)
Biological_process	ribosomal large subunit assembly Inferred from electronic annotation. Source: HAMAP translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H6QEY7 [UniParc]. Last modified April 18, 2012. Version 1. Checksum: 43BF430373852C9B	FASTA	117	13,472
	10 20 30 40 50 60 MTRAKSGKIS KNRHKKILKL AKGYRGRANS CFRVAIEKVE KALQYAYRDR RNRKRDFRGL 70 80 90 100 110 WIQRINAAVR EHGLVYSQFM GALKKTEIAI DRKVLAELAV NNSDGFVSIV EKAKAHI

References

[1]	Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A. Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Hauke EMBL AFB30560.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003318 Genomic DNA. Translation: AFB30560.1.
RefSeq	YP_005289196.1. NC_016911.1.
3D structure databases
ProteinModelPortal	H6QEY7.
SMR	H6QEY7. Positions 2-116.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFB30560; AFB30560; RPM_05180.
GeneID	11789118.
KEGG	rrh:RPM_05180.
Phylogenomic databases
KO	K02887.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H6QEY7_RICRI

Accession

Primary (citable) accession number: H6QEY7

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2012
Last sequence update:	April 18, 2012
Last modified:	April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)