H6PL28 (H6PL28_RICRI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
ATP synthase subunit a RuleBase RU000483 HAMAP-Rule MF_01393

Alternative name(s):
ATP synthase F0 sector subunit a HAMAP-Rule MF_01393
F-ATPase subunit 6 HAMAP-Rule MF_01393

Gene names

Name:	atpB HAMAP-Rule MF_01393
ORF Names:	RPL_00175 EMBL AFB22966.1

Organism

Rickettsia rickettsii str. Colombia EMBL AFB22966.1

Taxonomic identifier

1105102 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia rickettsii

Protein attributes

Sequence length	242 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane By similarity. RuleBase RU000483 HAMAP-Rule MF_01393
Subcellular location	Cell membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01393. Membrane; Multi-pass membrane protein By similarity RuleBase RU000483.
Sequence similarities	Belongs to the ATPase A chain family. RuleBase RU000483 HAMAP-Rule MF_01393

Ontologies

Keywords
Biological process	ATP synthesis HAMAP-Rule MF_01393 Hydrogen ion transport Ion transport Transport
Cellular component	CF(0) RuleBase RU000483 HAMAP-Rule MF_01393 Cell membrane HAMAP-Rule MF_01393 Membrane
Domain	Transmembrane Transmembrane helix HAMAP-Rule MF_01393
Molecular function	Hydrolase EMBL AFB22966.1
Gene Ontology (GO)
Biological_process	plasma membrane ATP synthesis coupled proton transport Inferred from electronic annotation. Source: HAMAP
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell proton-transporting ATP synthase complex, coupling factor F(o) Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	proton-transporting ATP synthase activity, rotational mechanism Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Transmembrane	29 – 49	21	Helical; By similarity HAMAP-Rule MF_01393
	Transmembrane	84 – 104	21	Helical; By similarity HAMAP-Rule MF_01393
	Transmembrane	114 – 134	21	Helical; By similarity HAMAP-Rule MF_01393
	Transmembrane	140 – 160	21	Helical; By similarity HAMAP-Rule MF_01393
	Transmembrane	181 – 201	21	Helical; By similarity HAMAP-Rule MF_01393
	Transmembrane	203 – 223	21	Helical; By similarity HAMAP-Rule MF_01393

Sequences

	Sequence		Length	Mass (Da)
	H6PL28 [UniParc]. Last modified April 18, 2012. Version 1. Checksum: 8A7B43DD96031F28	FASTA	242	27,376
	10 20 30 40 50 60 MTHSPLAQFD IKKLIDIKMF GFDVSFTNSS IYMLLASILA LTYFYLAFYK RKLVPSRLQV 70 80 90 100 110 120 SAEIVYNLVA DMLNQNIGVK GRKFIPLVFS LFIFILFCNL LGMTPYSFTA TSHIIVTFTL 130 140 150 160 170 180 AILVFLIVTI VGFVKHGLRF LTLFLPHGTP LWLAPLMIVI ELFTYLARPV SLSLRLAANM 190 200 210 220 230 240 MAGHVLLKVI AGFTVSLMIY LKFLPIPIMV ILIGFEIFVA ILQAYIFTIL SCMYLNDAIN LH

References

[1]	Johnson S.L., Munk A.C., Han S., Bruce D.C., Dasch G.A. Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Colombia EMBL AFB22966.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003306 Genomic DNA. Translation: AFB22966.1.
RefSeq	YP_005285590.1. NC_016908.1.
3D structure databases
ProteinModelPortal	H6PL28.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	11785409.
KEGG	rrc:RPL_00175.
Phylogenomic databases
KO	K02108.
Family and domain databases
Gene3D	1.20.120.220. 1 hit.
HAMAP	MF_01393. ATP_synth_a_bact.
InterPro	IPR000568. ATPase_F0-cplx_asu. IPR023011. ATPase_F0-cplx_asu_AS. [Graphical view]
PANTHER	PTHR11410. PTHR11410. 1 hit.
Pfam	PF00119. ATP-synt_A. 1 hit. [Graphical view]
PRINTS	PR00123. ATPASEA.
SUPFAM	SSF81336. ATPase_F0_A. 1 hit.
TIGRFAMs	TIGR01131. ATP_synt_6_or_A. 1 hit.
PROSITE	PS00449. ATPASE_A. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H6PL28_RICRI

Accession

Primary (citable) accession number: H6PL28

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2012
Last sequence update:	April 18, 2012
Last modified:	May 1, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)