H6PI62 (H6PI62_RICRI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S15 RuleBase RU003920 HAMAP-Rule MF_01343

Gene names

Name:	rpsO HAMAP-Rule MF_01343 EMBL AFB22152.1
ORF Names:	RPN_03170 EMBL AFB22152.1

Organism

Rickettsia rickettsii str. Brazil EMBL AFB22152.1

Taxonomic identifier

1105104 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia rickettsii

Protein attributes

Sequence length	91 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome By similarity. HAMAP-Rule MF_01343 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA By similarity. RuleBase RU004524 HAMAP-Rule MF_01343
Subunit structure	Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA By similarity. HAMAP-Rule MF_01343
Sequence similarities	Belongs to the ribosomal protein S15P family. RuleBase RU003919 HAMAP-Rule MF_01343

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding RuleBase RU004524 HAMAP-Rule MF_01343
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003919 HAMAP-Rule MF_01343 EMBL AFB22152.1
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H6PI62 [UniParc]. Last modified April 18, 2012. Version 1. Checksum: 5C6D4C302FA49114	FASTA	91	10,594
	10 20 30 40 50 60 MSITTERKQQ LIKEYAITEN DTGSSAVQCA ILTERINNLT EHFKSNHKDH TSRRGLLILV 70 80 90 GRRRRLLNYI KKNNVSKYLD LISKLGIRKI K

References

[1]	Johnson S.L., Davenport K.W., Han S., Bruce D.C., Dasch G.A. Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Brazil EMBL AFB22152.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003305 Genomic DNA. Translation: AFB22152.1.
RefSeq	YP_005292623.1. NC_016913.1.
3D structure databases
ProteinModelPortal	H6PI62.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFB22152; AFB22152; RPN_03170.
GeneID	11867334.
KEGG	rrb:RPN_03170.
Phylogenomic databases
KO	K02956.
Family and domain databases
Gene3D	1.10.287.10. 1 hit.
HAMAP	MF_01343_B. Ribosomal_S15_S13e_B.
InterPro	IPR000589. Ribosomal_S15. IPR005290. Ribosomal_S15_bac-type. IPR009068. S15_NS1_RNA-bd. [Graphical view]
PANTHER	PTHR23321:SF10. PTHR23321:SF10. 1 hit.
Pfam	PF00312. Ribosomal_S15. 1 hit. [Graphical view]
SUPFAM	SSF47060. S15/NS1_bind. 1 hit.
TIGRFAMs	TIGR00952. S15_bact. 1 hit.
PROSITE	PS00362. RIBOSOMAL_S15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H6PI62_RICRI

Accession

Primary (citable) accession number: H6PI62

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2012
Last sequence update:	April 18, 2012
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)