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H6PBV4 (H6PBV4_STRIC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length678 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL AEZ62751.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H6PBV4 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 50B1007A50189699

FASTA67874,498
        10         20         30         40         50         60 
MQAIKDAGYT SVQTSPINQV VVGNGGNKSL KNWYYQYQPT LHTIGNYQLG TEEEFKELNR 

        70         80         90        100        110        120 
VADQYGIKII IDAVLNHTTS DYNQISPEIK KIPNWTHGNK EIKNWNDRYD VTQNALLGLY 

       130        140        150        160        170        180 
DLNTQNPQIQ QYLLNFLKTA VADGADGFRY DTAKHIELPG EYGSNFWNVI LNNGSEFQYG 

       190        200        210        220        230        240 
EVLQDSISHE ADYSKLMSVT ASNYGNQIRN DLEDKRAAAG NLMNYQAQGV DPSNLVTWVE 

       250        260        270        280        290        300 
SHDTYANDDQ VSTWMSDDDI RLGWSMITAR AKGTPLFFSR PVGGGNGTRF PGQSQIGDAG 

       310        320        330        340        350        360 
SDLYKDPTVK AVNKFHNAMV GESEYIRNPN GDEQVAMIER GNKGAVIVNL GNGDKQLNSD 

       370        380        390        400        410        420 
TKLADGTYTD QVSGRQFYVS NGHITGNVSS RSSVVLYDAK PDATAQVSID GYKEGDNSIS 

       430        440        450        460        470        480 
AATEVTLKAK NAESATYKVD NGQEVAFQDG DKITVGEGLE AGQSTTVTVT ATGADGQAIT 

       490        500        510        520        530        540 
KTYTFTMKDP SAETNIYFQN PDNWSDVYAY MYSAKDTKLL GAWPGTKMTK DSTGRYTISV 

       550        560        570        580        590        600 
PASYAEEGVK VIFTNNQGSQ FPQKEGFDFK AEGVYSKAGL VPDVPAGKTR VTFDNPGGWD 

       610        620        630        640        650        660 
NANAYVYYGN PVQYPLGAWP GTQMTKDDAG NFYLDLPEEY ATVNTKIIFN QPGTSNQFPY 

       670 
SVGFDLVKSG NYNKDGLK 

« Hide

References

[1]"Complete Genome Sequence of the African Dairy Isolate Streptococcus infantarius subsp. infantarius Strain CJ18."
Jans C., Follador R., Lacroix C., Meile L., Stevens M.J.
J. Bacteriol. 194:2105-2106(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CJ18 EMBL AEZ62751.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003295 Genomic DNA. Translation: AEZ62751.1.
RefSeqYP_005204222.1. NC_016826.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEZ62751; AEZ62751; Sinf_1443.
GeneID11877976.
KEGGsif:Sinf_1443.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycSINF1069533:GLL3-1523-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH6PBV4_STRIC
AccessionPrimary (citable) accession number: H6PBV4
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)