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H6NYY5 (H6NYY5_SALTI) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Exodeoxyribonuclease 7 large subunit HAMAP-Rule MF_00378
EC=3.1.11.6 HAMAP-Rule MF_00378
Alternative name(s):
Exodeoxyribonuclease VII large subunit HAMAP-Rule MF_00378
Gene names
Name:xseA HAMAP-Rule MF_00378
ORF Names:STBHUCCB_3810 EMBL AEZ44125.1
OrganismSalmonella enterica subsp. enterica serovar Typhi str. P-stx-12 EMBL AEZ44125.1
Taxonomic identifier1132507 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella ›

Protein attributes

Sequence length449 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity. HAMAP-Rule MF_00378 SAAS SAAS025824

Catalytic activity

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates. HAMAP-Rule MF_00378

Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates. SAAS SAAS025824

Subunit structure

Heterooligomer composed of large and small subunits By similarity. HAMAP-Rule MF_00378 SAAS SAAS025824

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00378 SAAS SAAS025824.

Sequence similarities

Belongs to the XseA family. HAMAP-Rule MF_00378

Sequences

Sequence LengthMass (Da)Tools
H6NYY5 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 511957DEC878F5D2

FASTA44950,721
        10         20         30         40         50         60 
MLSSQTSSIF TVSRLNQTVR LLLEQEMGQV WISGEISNFT QPASGHWYFT LKDDTAQVRC 

        70         80         90        100        110        120 
AMFRNSNRRV TFRPQHGQQV LVRANITLYE PRGDYQIIAE SMQPAGEGLL QQKYEQLKAK 

       130        140        150        160        170        180 
LHAEGLFDQQ HKQPLPSPAH CVGVITSKTG AALHDILHVL KRRDPSLPVI IYPTAVQGDD 

       190        200        210        220        230        240 
APGQIVRAIE LANTRGECDV LIVGRGGGSL EDLWSFNDER VARAIFASRI PVVSAVGHET 

       250        260        270        280        290        300 
DVTIADFVAD LRAPTPSAAA EIVSRNQQEL LRQIQSAQQR LGMAMDYYLA NRSRRFTQIF 

       310        320        330        340        350        360 
HRLQQQHPQL RLARQQTALE RLRQRMGFAL EARIKQATQR QQRVSQRLSQ QNPQPRIHRV 

       370        380        390        400        410        420 
QSRIQQLEYR LTENIRSRLS EQRERFGNAV THLEAVSPLA TLARGYTVST TTDGKVLKKI 

       430        440 
KQVKAGDIMT TRLEDGWLES EVKSVTPGT

« Hide

References

[1]"Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhi P-stx-12."
Ong S.Y., Pratap C.B., Wan X., Hou S., Abdul Rahman A.Y., Saito J.A., Nath G., Alam M.
J. Bacteriol. 194:2115-2116(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: P-stx-12 EMBL AEZ44125.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003278 Genomic DNA. Translation: AEZ44125.1.
RefSeqYP_005215978.1. NC_016832.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEZ44125; AEZ44125; STBHUCCB_3810.
GeneID11818878.
KEGGsex:STBHUCCB_3810.

Phylogenomic databases

KOK03601.
OMAENAQVRC.

Family and domain databases

HAMAPMF_00378. Exonuc_7_L.
InterProIPR003753. Exonuc_VII_L.
IPR020579. Exonuc_VII_lsu_C.
IPR025824. OB-fold_nuc-bd_dom.
[Graphical view]
PfamPF02601. Exonuc_VII_L. 1 hit.
PF13742. tRNA_anti_2. 1 hit.
[Graphical view]
TIGRFAMsTIGR00237. xseA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH6NYY5_SALTI
AccessionPrimary (citable) accession number: H6NYY5
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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