Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

H6NS25 (H6NS25_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
ORF Names:PM3016_7068 EMBL AFC33654.1
OrganismPaenibacillus mucilaginosus 3016 [Complete proteome] EMBL AFC33654.1
Taxonomic identifier1116391 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
H6NS25 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: E2E45545C9379069

FASTA39643,425
        10         20         30         40         50         60 
MAKAKFERNK PHVNIGTIGH VDHGKTTLTA AITTVLSKKY GGAAVAFDQI DKAPEERERG 

        70         80         90        100        110        120 
ITISTAHVEY ETPNRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPY IVVFLNKCDM VEDEELLELV EMEVRDLLNE YEFPGDDTPI IRGAAREALQ 

       190        200        210        220        230        240 
NPDGPWAEKI VELFEQIDTY IPTPERDTDK PFLMPVEDVF TITGRGTVAT GRVERGVIKV 

       250        260        270        280        290        300 
GDEIEIIGLA EETRKSVVTG VEMFRKLLDS AQAGDNIGAL LRGVDRKDIE RGQVLAKPGS 

       310        320        330        340        350        360 
VKPHTNFSAQ IYVLTKEEGG RHKPFFTGYR PQFYFRTTDV TGIINLPEGS EMVMPGDNIT 

       370        380        390 
VTVELISPIA IEEGTRFAIR EGGRTVGAGA VASISK 

« Hide

References

[1]"Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3016 EMBL AFC33654.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003235 Genomic DNA. Translation: AFC33654.1.
RefSeqYP_005316803.1. NC_016935.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC33654; AFC33654; PM3016_7068.
GeneID11889073.
KEGGpmq:PM3016_7068.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycPMUC1116391:GLI5-7109-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6NS25_9BACL
AccessionPrimary (citable) accession number: H6NS25
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)