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H6NS25

- H6NS25_9BACL

UniProt

H6NS25 - H6NS25_9BACL

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Protein

Elongation factor Tu

Gene

tuf

Organism
Paenibacillus mucilaginosus 3016
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi81 – 855GTPUniRule annotation
Nucleotide bindingi136 – 1394GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciPMUC1116391:GLI5-7109-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
ORF Names:PM3016_7068Imported
OrganismiPaenibacillus mucilaginosus 3016Imported
Taxonomic identifieri1116391 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000007523: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H6NS25-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKAKFERNK PHVNIGTIGH VDHGKTTLTA AITTVLSKKY GGAAVAFDQI
60 70 80 90 100
DKAPEERERG ITISTAHVEY ETPNRHYAHV DCPGHADYVK NMITGAAQMD
110 120 130 140 150
GAILVVSAAD GPMPQTREHI LLSRQVGVPY IVVFLNKCDM VEDEELLELV
160 170 180 190 200
EMEVRDLLNE YEFPGDDTPI IRGAAREALQ NPDGPWAEKI VELFEQIDTY
210 220 230 240 250
IPTPERDTDK PFLMPVEDVF TITGRGTVAT GRVERGVIKV GDEIEIIGLA
260 270 280 290 300
EETRKSVVTG VEMFRKLLDS AQAGDNIGAL LRGVDRKDIE RGQVLAKPGS
310 320 330 340 350
VKPHTNFSAQ IYVLTKEEGG RHKPFFTGYR PQFYFRTTDV TGIINLPEGS
360 370 380 390
EMVMPGDNIT VTVELISPIA IEEGTRFAIR EGGRTVGAGA VASISK
Length:396
Mass (Da):43,425
Last modified:April 18, 2012 - v1
Checksum:iE2E45545C9379069
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003235 Genomic DNA. Translation: AFC33654.1.
RefSeqiWP_013921164.1. NC_016935.1.
YP_005316803.1. NC_016935.1.

Genome annotation databases

EnsemblBacteriaiAFC33654; AFC33654; PM3016_7068.
GeneIDi11889073.
KEGGipmq:PM3016_7068.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003235 Genomic DNA. Translation: AFC33654.1 .
RefSeqi WP_013921164.1. NC_016935.1.
YP_005316803.1. NC_016935.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFC33654 ; AFC33654 ; PM3016_7068 .
GeneIDi 11889073.
KEGGi pmq:PM3016_7068.

Phylogenomic databases

KOi K02358.

Enzyme and pathway databases

BioCyci PMUC1116391:GLI5-7109-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
    Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
    J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3016Imported.

Entry informationi

Entry nameiH6NS25_9BACL
AccessioniPrimary (citable) accession number: H6NS25
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3