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H6NQN9 (H6NQN9_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PM3016_6910 EMBL AFC33507.1
OrganismPaenibacillus mucilaginosus 3016 [Complete proteome] EMBL AFC33507.1
Taxonomic identifier1116391 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length316 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFC33507.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H6NQN9 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 4730F89EA89DEA3C

FASTA31635,849
        10         20         30         40         50         60 
MEWQPIVPFE PIRTETAPSG DGWVGQIKWD GTRILTYASG GTVRLFNRKG HERTLQYPEL 

        70         80         90        100        110        120 
LDLSSYCTAE SVILDGEVIA IADGRPNFQE VMRRDSVRKA QHLALAQKQV PISYMIFDMP 

       130        140        150        160        170        180 
YLDGEWITDK PLRERQRLLQ ERVRGNATVQ LVPSVAGMND LFGVMKQHKM EGIVCKDLES 

       190        200        210        220        230        240 
KYLIGGKDKR WQKMKIYNDL VAVVGGVTHR AGQVNALMLG LYDAEGRLWY IGHAGTGRFT 

       250        260        270        280        290        300 
QQTWRELTEK VREMTLPERP FVNVPERSKD AVWIKPLLTV KVSYMEWTAG RTLRQPSIQA 

       310 
LVGAQPADCT FGQLDG 

« Hide

References

[1]"Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3016 EMBL AFC33507.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003235 Genomic DNA. Translation: AFC33507.1.
RefSeqYP_005316656.1. NC_016935.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC33507; AFC33507; PM3016_6910.
GeneID11888903.
KEGGpmq:PM3016_6910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPMUC1116391:GLI5-6940-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6NQN9_9BACL
AccessionPrimary (citable) accession number: H6NQN9
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)