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H6NMB8 (H6NMB8_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length437 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 SAAS SAAS001998 HAMAP-Rule MF_00455

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site991 By similarity HAMAP-Rule MF_00455
Active site1021 By similarity HAMAP-Rule MF_00455
Metal binding2301Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2661Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2661Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2691Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2941Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3051Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3071Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3371Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
H6NMB8 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: AE4B41DF0657C078

FASTA43749,035
        10         20         30         40         50         60 
MSIFKNVPKI AYEGRNSDNP FAFKHYNPQE VVLGKTMEEH LRFAVAYWHT YTANGTDPFG 

        70         80         90        100        110        120 
VGTMVRAWDS YSGLDQAKKR VEANFEFLDK IGVPYFCFHD RDIAPEGETL QETNKNLDVI 

       130        140        150        160        170        180 
VAMTKEYMQS SGKKLLWNTA NMFSNPRFVH GAGTTNNADV FAYAAAQVKK GLEVGLELGA 

       190        200        210        220        230        240 
ENYVFWGGRE GYETLLNTNM KLELDNLARL LHMAVDYAKE IGFGAQFLIE PKPKEPTKHQ 

       250        260        270        280        290        300 
YDFDAATTIA FLQNYGLKEH FKLNLEANHA TLAGHTFEHE LHVARINGML GSLDANQGDM 

       310        320        330        340        350        360 
LLGWDTDEFP TDLYSATLTL YEVLKNGGLG KGGVNFDAKV RRGSFEDEDL FYAHIAGMDS 

       370        380        390        400        410        420 
YARGLKAAAK LIEERILDDI IDNRYRSFNE GIGAEIVSGK ATLASLEQYA LQNNPIRNES 

       430 
GRLERIRATL NEVIFSV 

« Hide

References

[1]"Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3016 EMBL AFC33280.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003235 Genomic DNA. Translation: AFC33280.1.
RefSeqYP_005316429.1. NC_016935.1.

3D structure databases

ProteinModelPortalH6NMB8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC33280; AFC33280; PM3016_6667.
GeneID11888661.
KEGGpmq:PM3016_6667.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Enzyme and pathway databases

BioCycPMUC1116391:GLI5-6698-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6NMB8_9BACL
AccessionPrimary (citable) accession number: H6NMB8
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)