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H6NLW0 (H6NLW0_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA ligase EMBL AFC31675.1
Gene names
ORF Names:PM3016_4943 EMBL AFC31675.1
OrganismPaenibacillus mucilaginosus 3016 EMBL AFC31675.1
Taxonomic identifier1116391 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus ›

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFC31675.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H6NLW0 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 8D38853D6174B4EE

FASTA47553,804
        10         20         30         40         50         60 
MPVFKPMAPI LTDRLPQGDE WGYQLKWDGF RILALVDEGR VELVSKYGLP KTKTYPDLVR 

        70         80         90        100        110        120 
VLSRLPGRFL LDGEAVLLDP ATGRPSFQRM QQRDKLADPA LIRRAAERSP VQYVAFDLLQ 

       130        140        150        160        170        180 
LGGRDLRGRP FRERHEALDQ LAADWEPPLC TAQLFPDGDA LWDWVCEREW EGVIAKRLDS 

       190        200        210        220        230        240 
PYAEGKDHRD WFKRKTALRL EAEAVGIVYR EGRVASLVLQ QGGKYLGRAS SGLDAAAKRE 

       250        260        270        280        290        300 
LGRLPTVPAA GPRSGELPEG LRGAEIRWLA EPPARHRERP GADRSGTAAA PETAGDRRES 

       310        320        330        340        350        360 
DMTDERGIVQ VDGVEVEISR PDKLLWPEPG ITKLIYLQKL AALSPYLLPY CRDRHLTTRR 

       370        380        390        400        410        420 
FPHGVQGKFF YQKNAPGGRP DYVRTHLYEG VEYVNLDSLP VLLWLGNLAA LEFHPSFETV 

       430        440        450        460        470 
HGEEPQEWVI DVDPSGRATP VSWRRPPGSE RRWKGWACVR SPRPPELRAF KSWSR

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References

[1]"Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3016 EMBL AFC31675.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003235 Genomic DNA. Translation: AFC31675.1.
RefSeqYP_005314824.1. NC_016935.1.

3D structure databases

ProteinModelPortalH6NLW0.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC31675; AFC31675; PM3016_4943.
GeneID11886946.
KEGGpmq:PM3016_4943.

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6NLW0_9BACL
AccessionPrimary (citable) accession number: H6NLW0
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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