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H6NLM5 (H6NLM5_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PM3016_4181 EMBL AFC30959.1
OrganismPaenibacillus mucilaginosus 3016 [Complete proteome] EMBL AFC30959.1
Taxonomic identifier1116391 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length424 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
H6NLM5 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: F6BF9B3405EADA84

FASTA42445,479
        10         20         30         40         50         60 
MLDERVTAVY LVETPYTLER AAEVIAGEQS TGTFTAVPGE TASLKERHGA AIVSVEALEE 

        70         80         90        100        110        120 
TDTPSLPGTK VPRGHDGKYR RGLIKVSYPL LNFGPSLPNL MSAVAGNLFE LQELSGLRLV 

       130        140        150        160        170        180 
DLELPEAFAA AYPGPKFGVE GTRRLTGVYG RPVIGTIVKP SVGLSMEQLG SLVREMALAG 

       190        200        210        220        230        240 
VDFIKDDELN ANPPYAPLKD KVKAVMAEVE RAADETGRRV MYAFNITGDI DELRRNHDLV 

       250        260        270        280        290        300 
VEAGGNCVMV SINSIGVAGL SWLNRYSQVP IHAHRNGWGM MTRSPLLGME FTVYQKLCRL 

       310        320        330        340        350        360 
AGADHLHVNG LGSKFYESDE SVVRSIRACR QPLFGGYGTM PVVSSGQWAG TAGITYEQAG 

       370        380        390        400        410        420 
TTDLMHLAGG GILAHPDGPA AGVESMKQGW EAAVKAVAAE EYAVTHGALR RAIERFGAVE 


GRRA 

« Hide

References

[1]"Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3016 EMBL AFC30959.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003235 Genomic DNA. Translation: AFC30959.1.
RefSeqYP_005314108.1. NC_016935.1.

3D structure databases

ProteinModelPortalH6NLM5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC30959; AFC30959; PM3016_4181.
GeneID11886196.
KEGGpmq:PM3016_4181.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Enzyme and pathway databases

BioCycPMUC1116391:GLI5-4233-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6NLM5_9BACL
AccessionPrimary (citable) accession number: H6NLM5
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)