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H6NKV8

- H6NKV8_9BACL

UniProt

H6NKV8 - H6NKV8_9BACL

Protein
Submitted name:

ATP dependent DNA ligase

Gene

PM3016_2376

Organism
Paenibacillus mucilaginosus 3016
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (18 Apr 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPMUC1116391:GLI5-2464-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    ORF Names:PM3016_2376Imported
    OrganismiPaenibacillus mucilaginosus 3016Imported
    Taxonomic identifieri1116391 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000007523: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliH6NKV8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    H6NKV8-1 [UniParc]FASTAAdd to Basket

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    MFISPMLLET AKHPFSNEHY LFEPKIDGHR LVLSRQGGQT RLYTRHHNDC    50
    TFQYPELNPI ALDDVILDGE VAATDASGAI DFEAVMERFA LRRADKVRRA 100
    AAERPVNYIV FDVLRYNGVD LRGLPLYRRK EILAGIDFGN PYMAKVPVVP 150
    KEGERLFEQI AARQLEGIVA KRMDSVYVGH RSEAWLKIIN WQYAEVYLTG 200
    YKKEGFGWLA ASAGPGGILK PAGLIELGIT PKHRTAFNGV RDQLQTGEDG 250
    EFVYLEPKLK AKVKMRNWTR AGLLRSPVFM EFCR 284
    Length:284
    Mass (Da):32,270
    Last modified:April 18, 2012 - v1
    Checksum:iA87D5C56A4BFDB0E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003235 Genomic DNA. Translation: AFC29264.1.
    RefSeqiWP_014369638.1. NC_016935.1.
    YP_005312413.1. NC_016935.1.

    Genome annotation databases

    EnsemblBacteriaiAFC29264; AFC29264; PM3016_2376.
    GeneIDi11884427.
    KEGGipmq:PM3016_2376.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003235 Genomic DNA. Translation: AFC29264.1 .
    RefSeqi WP_014369638.1. NC_016935.1.
    YP_005312413.1. NC_016935.1.

    3D structure databases

    ProteinModelPortali H6NKV8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFC29264 ; AFC29264 ; PM3016_2376 .
    GeneIDi 11884427.
    KEGGi pmq:PM3016_2376.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PMUC1116391:GLI5-2464-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
      Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
      J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 3016Imported.

    Entry informationi

    Entry nameiH6NKV8_9BACL
    AccessioniPrimary (citable) accession number: H6NKV8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2012
    Last sequence update: April 18, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3