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H6NKV8 (H6NKV8_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL AFC29264.1
Gene names
ORF Names:PM3016_2376 EMBL AFC29264.1
OrganismPaenibacillus mucilaginosus 3016 EMBL AFC29264.1
Taxonomic identifier1116391 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus ›

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AFC29264.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H6NKV8 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: A87D5C56A4BFDB0E

FASTA28432,270
        10         20         30         40         50         60 
MFISPMLLET AKHPFSNEHY LFEPKIDGHR LVLSRQGGQT RLYTRHHNDC TFQYPELNPI 

        70         80         90        100        110        120 
ALDDVILDGE VAATDASGAI DFEAVMERFA LRRADKVRRA AAERPVNYIV FDVLRYNGVD 

       130        140        150        160        170        180 
LRGLPLYRRK EILAGIDFGN PYMAKVPVVP KEGERLFEQI AARQLEGIVA KRMDSVYVGH 

       190        200        210        220        230        240 
RSEAWLKIIN WQYAEVYLTG YKKEGFGWLA ASAGPGGILK PAGLIELGIT PKHRTAFNGV 

       250        260        270        280 
RDQLQTGEDG EFVYLEPKLK AKVKMRNWTR AGLLRSPVFM EFCR

« Hide

References

[1]"Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3016 EMBL AFC29264.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003235 Genomic DNA. Translation: AFC29264.1.
RefSeqYP_005312413.1. NC_016935.1.

3D structure databases

ProteinModelPortalH6NKV8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC29264; AFC29264; PM3016_2376.
GeneID11884427.
KEGGpmq:PM3016_2376.

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6NKV8_9BACL
AccessionPrimary (citable) accession number: H6NKV8
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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