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H6NGF8 (H6NGF8_9BACL) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Cobyric acid synthase EMBL AFC33040.1
Gene names
ORF Names:PM3016_6408 EMBL AFC33040.1
OrganismPaenibacillus mucilaginosus 3016 EMBL AFC33040.1
Taxonomic identifier1116391 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus ›

Protein attributes

Sequence length923 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH2 groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation By similarity. SAAS SAAS017929

Pathway

Cofactor biosynthesis; adenosylcobalamin biosynthesis. SAAS SAAS017929

Sequence similarities

Contains 1 GATase cobBQ-type domain. SAAS SAAS017929

Sequences

Sequence LengthMass (Da)Tools
H6NGF8 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 2AC267C3BA4A7115

FASTA923100,462
        10         20         30         40         50         60 
MLEKYGHGGD LQTAAEKYGR PPGEFVDYSS NMNPFGPPEA AGHILRTRWQ EAAAYPDPAA 

        70         80         90        100        110        120 
RELTRRLAEK HGVDPACILV GNGAAELIDL AVRVLRPAVT GLARPSFKEY EDAVRKTGGA 

       130        140        150        160        170        180 
VKDIPLREEQ GFELQLQDLE AAAPHCDLLF LGSPNNPTGR LLPQAVRERL ASDALPAVVD 

       190        200        210        220        230        240 
EAFLDFLPEE EKLSLAAAAS SSPNLIVLRS MTKFYAIPGL RLGYAVAHPD RIWAMRELQV 

       250        260        270        280        290        300 
PWSVNAFAQW IGAAVLEDRA YARRTLEWLP GARAELLAGL RELGVLAWDS DTNYVLCSLR 

       310        320        330        340        350        360 
ALGWTGRGLQ EAMGRRGILI RDASLFPGLD DSYVRLAVKL PQMNRRLLAV LAEVFAERQR 

       370        380        390        400        410        420 
EGRGRAAAEA AAAGAAQTAP YAVEGLGAEA PASSGPDAPL SPAGAGPSRR RGSVVMLQGT 

       430        440        450        460        470        480 
ASDVGKSLLT AALCRILLQD GRRVAPFKSQ NMSLNSYVTP DGKEIGRAQG MQADACRIPA 

       490        500        510        520        530        540 
TTDMNPILLK PKKDMVAQVV VHGRPYQDLD ARTYRERYLP EAEGVVKEAL ERLRSVHDVV 

       550        560        570        580        590        600 
VIEGAGSPAE VNLKDRDIVN MRLAGWADAP VLLVADIDRG GVFASLVGTL EILTPEERAR 

       610        620        630        640        650        660 
VRGFVINKFR GDVTLLQPGI DWLEARTGIP VLGVIPYLPQ LGLEDEDSAS LERKLAETAR 

       670        680        690        700        710        720 
SGPPAKLPPE MLDIAVLRLP RISNFTDADP LAFEPDVRLR FVSSPEDFGQ PDAVIIPGSK 

       730        740        750        760        770        780 
NTVDDLLYLR SSGLDRRLLA YAAGGGFVTG ICAGYQMLGA RLLDPQLVES DKPELEGLGL 

       790        800        810        820        830        840 
LPTETLFAAE KRTVQAAGVA RLYGGYPVEG YEIHMGRTTF LEPVEHPFLL QEEGSAGLPD 

       850        860        870        880        890        900 
GAAVAEGRVW GTYLHGVLHS DDFRRAWLNR IRESRGLAPL PAELRFTERR EAAFDRLAGH 

       910        920 
VRSHLDMERL YEMIQEQETA ILT

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References

[1]"Complete Genome Sequence of Paenibacillus mucilaginosus 3016, a Bacterium Functional as Microbial Fertilizer."
Ma M., Wang Z., Li L., Jiang X., Guan D., Cao F., Chen H., Wang X., Shen D., Du B., Li J.
J. Bacteriol. 194:2777-2778(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 3016 EMBL AFC33040.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003235 Genomic DNA. Translation: AFC33040.1.
RefSeqYP_005316189.1. NC_016935.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC33040; AFC33040; PM3016_6408.
GeneID11888397.
KEGGpmq:PM3016_6408.

Enzyme and pathway databases

BioCycPMUC1116391:GLI5-6434-MONOMER.
UniPathwayUPA00148.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
HAMAPMF_00028. CobQ.
InterProIPR004839. Aminotransferase_I/II.
IPR017929. CobB/CobQ_GATase.
IPR005860. CobD.
IPR002586. CobQ/CobB/MinD/ParA_Nub-bd_dom.
IPR004459. CobQ_synth.
IPR011698. GATase_3.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR027417. P-loop_NTPase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
PF01656. CbiA. 1 hit.
PF07685. GATase_3. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00313. cobQ. 1 hit.
TIGR01140. L_thr_O3P_dcar. 1 hit.
PROSITEPS00105. AA_TRANSFER_CLASS_1. 1 hit.
PS51274. GATASE_COBBQ. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6NGF8_9BACL
AccessionPrimary (citable) accession number: H6NGF8
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: May 29, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info