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H6N063

- H6N063_GORPV

UniProt

H6N063 - H6N063_GORPV

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
GPOL_c47210
Organism
Gordonia polyisoprenivorans (strain DSM 44266 / VH2)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciGPOL1112204:GJWY-4712-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:GPOL_c47210Imported
OrganismiGordonia polyisoprenivorans (strain DSM 44266 / VH2)Imported
Taxonomic identifieri1112204 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia
ProteomesiUP000009154: Chromosome

Structurei

3D structure databases

ProteinModelPortaliH6N063.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H6N063-1 [UniParc]FASTAAdd to Basket

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MGDDGEVDLP VTPPVAPMLA KAASMVPAQP ADNPEWSYEP KWDGFRALIF    50
RDGDEVVIGS RGGKDLARYF PEIVAAAREE LPLKVVLDGE IGVPSLIGDT 100
HRLDWDSLAQ RIHPAASRVA MLAETTPAIF IGFDALALGN VGVIDESFVT 150
RREALVEAIG PGGRDRRFHV SRVTADPAVA EDWFSAFEGA GLDGVVAKPL 200
AGHYVENKRE MIKVKHKRTA DCVVIGYRVH KSGTGLGSML LGLFYDGELR 250
MVGGAGAFTD AKRAELQQMF EPMRLDPDKP SAGEPTRWRS EKSGEWIPIR 300
PELVAEVAYD QMENGRFRHT VKFLRWRPDR EPDSCGYEQL DVPLTYDLHD 350
VLEGLD 356
Length:356
Mass (Da):39,262
Last modified:April 18, 2012 - v1
Checksum:iE68277DC931183B3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003119 Genomic DNA. Translation: AFA75720.1.
RefSeqiWP_014361860.1. NC_016906.1.
YP_005285086.1. NC_016906.1.

Genome annotation databases

EnsemblBacteriaiAFA75720; AFA75720; GPOL_c47210.
GeneIDi11784730.
KEGGigpo:GPOL_c47210.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003119 Genomic DNA. Translation: AFA75720.1 .
RefSeqi WP_014361860.1. NC_016906.1.
YP_005285086.1. NC_016906.1.

3D structure databases

ProteinModelPortali H6N063.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFA75720 ; AFA75720 ; GPOL_c47210 .
GeneIDi 11784730.
KEGGi gpo:GPOL_c47210.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci GPOL1112204:GJWY-4712-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Involvement of Two Latex-Clearing Proteins during Rubber Degradation and Insights into the Subsequent Degradation Pathway Revealed by the Genome Sequence of Gordonia polyisoprenivorans Strain VH2."
    Hiessl S., Schuldes J., Thurmer A., Halbsguth T., Broker D., Angelov A., Liebl W., Daniel R., Steinbuchel A.
    Appl. Environ. Microbiol. 78:2874-2887(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44266 / VH2.

Entry informationi

Entry nameiH6N063_GORPV
AccessioniPrimary (citable) accession number: H6N063
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 3, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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