H6N063 (H6N063_GORPV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase EMBL AFA75720.1
EC=6.5.1.1 EMBL AFA75720.1

Gene names

Ordered Locus Names:

GPOL_c47210 EMBL AFA75720.1

Organism

Gordonia polyisoprenivorans (strain DSM 44266 / VH2) [Complete proteome] [HAMAP] EMBL AFA75720.1

Taxonomic identifier

1112204 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Gordoniaceae › Gordonia › Gordonia polyisoprenivorans

Protein attributes

Sequence length	356 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AFA75720.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H6N063 [UniParc]. Last modified April 18, 2012. Version 1. Checksum: E68277DC931183B3	FASTA	356	39,262
	10 20 30 40 50 60 MGDDGEVDLP VTPPVAPMLA KAASMVPAQP ADNPEWSYEP KWDGFRALIF RDGDEVVIGS 70 80 90 100 110 120 RGGKDLARYF PEIVAAAREE LPLKVVLDGE IGVPSLIGDT HRLDWDSLAQ RIHPAASRVA 130 140 150 160 170 180 MLAETTPAIF IGFDALALGN VGVIDESFVT RREALVEAIG PGGRDRRFHV SRVTADPAVA 190 200 210 220 230 240 EDWFSAFEGA GLDGVVAKPL AGHYVENKRE MIKVKHKRTA DCVVIGYRVH KSGTGLGSML 250 260 270 280 290 300 LGLFYDGELR MVGGAGAFTD AKRAELQQMF EPMRLDPDKP SAGEPTRWRS EKSGEWIPIR 310 320 330 340 350 PELVAEVAYD QMENGRFRHT VKFLRWRPDR EPDSCGYEQL DVPLTYDLHD VLEGLD

References

[1]

"Involvement of two latex-clearing proteins during rubber degradation and insights into the subsequent degradation pathway revealed by the genome sequence of Gordonia polyisoprenivorans strain VH2." Hiessl S., Schuldes J., Thurmer A., Halbsguth T., Broker D., Angelov A., Liebl W., Daniel R., Steinbuchel A. Appl. Environ. Microbiol. 78:2874-2887(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44266 / VH2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003119 Genomic DNA. Translation: AFA75720.1.
RefSeq	YP_005285086.1. NC_016906.1.
3D structure databases
ProteinModelPortal	H6N063.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFA75720; AFA75720; GPOL_c47210.
GeneID	11784730.
KEGG	gpo:GPOL_c47210.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H6N063_GORPV

Accession

Primary (citable) accession number: H6N063

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2012
Last sequence update:	April 18, 2012
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)