Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

H6MZ78 (H6MZ78_GORPV) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.15 EMBL AFA74414.1
Gene names
Name:gadB EMBL AFA74414.1
Ordered Locus Names:GPOL_c34020 EMBL AFA74414.1
OrganismGordonia polyisoprenivorans (strain DSM 44266 / VH2) [Complete proteome] [HAMAP] EMBL AFA74414.1
Taxonomic identifier1112204 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia

Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
H6MZ78 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: 8DC00C09F3DC7A29

FASTA46952,747
        10         20         30         40         50         60 
MTKRKHTNAR ATTNLNDSLT VNPVFVRPGE ATEYPKFAIP ESMSLPETAY QIVHDEAMLD 

        70         80         90        100        110        120 
GNARLNLATF VSTWMDDEAR RLYAETYDKN MIDKDEYPQT AAIEDRCWKI IADLWHVPDV 

       130        140        150        160        170        180 
DKSIGTSTIG SSEAAMLGGL ALKRHWQARR KAEGKSIEKP NLVLSTAVQV CWEKFLNYFE 

       190        200        210        220        230        240 
VEPRWVPVSQ EHFVFDGHEL ETYVDENTIG VVAILGVTYN GLYEPVQQIS AKLDEIEKNT 

       250        260        270        280        290        300 
GLDVKIHVDG ASGAMVAPFC QPDLEWDFRV SRVVSINTSG HKYGLVYPGL GWIVWRDSEA 

       310        320        330        340        350        360 
LPESMVFHCS YLGGDMPTLA LNFSRPGAQV LLQYYNFLRL GREGYRLIQQ GSIDVATYLS 

       370        380        390        400        410        420 
SAIAEMGPFE LVSKGDTIPV FAWKLKDGYT DKWSLYDLSD RLRLKGWLVP AYPMADGLAD 

       430        440        450        460 
WTLQRIVVRA GLSHDLATAL LTDLESEVAF LDQLESPMPR EGTGSHFHH 

« Hide

References

[1]"Involvement of Two Latex-Clearing Proteins during Rubber Degradation and Insights into the Subsequent Degradation Pathway Revealed by the Genome Sequence of Gordonia polyisoprenivorans Strain VH2."
Hiessl S., Schuldes J., Thurmer A., Halbsguth T., Broker D., Angelov A., Liebl W., Daniel R., Steinbuchel A.
Appl. Environ. Microbiol. 78:2874-2887(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 44266 / VH2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003119 Genomic DNA. Translation: AFA74414.1.
RefSeqYP_005283780.1. NC_016906.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFA74414; AFA74414; GPOL_c34020.
GeneID11783406.
KEGGgpo:GPOL_c34020.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycGPOL1112204:GJWY-3394-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH6MZ78_GORPV
AccessionPrimary (citable) accession number: H6MZ78
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)