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H6MZ78

- H6MZ78_GORPV

UniProt

H6MZ78 - H6MZ78_GORPV

Protein

Glutamate decarboxylase

Gene

gadB

Organism
Gordonia polyisoprenivorans (strain DSM 44266 / VH2)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (18 Apr 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGPOL1112204:GJWY-3394-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadBImported
    Ordered Locus Names:GPOL_c34020Imported
    OrganismiGordonia polyisoprenivorans (strain DSM 44266 / VH2)Imported
    Taxonomic identifieri1112204 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeGordoniaceaeGordonia
    ProteomesiUP000009154: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    H6MZ78-1 [UniParc]FASTAAdd to Basket

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    MTKRKHTNAR ATTNLNDSLT VNPVFVRPGE ATEYPKFAIP ESMSLPETAY    50
    QIVHDEAMLD GNARLNLATF VSTWMDDEAR RLYAETYDKN MIDKDEYPQT 100
    AAIEDRCWKI IADLWHVPDV DKSIGTSTIG SSEAAMLGGL ALKRHWQARR 150
    KAEGKSIEKP NLVLSTAVQV CWEKFLNYFE VEPRWVPVSQ EHFVFDGHEL 200
    ETYVDENTIG VVAILGVTYN GLYEPVQQIS AKLDEIEKNT GLDVKIHVDG 250
    ASGAMVAPFC QPDLEWDFRV SRVVSINTSG HKYGLVYPGL GWIVWRDSEA 300
    LPESMVFHCS YLGGDMPTLA LNFSRPGAQV LLQYYNFLRL GREGYRLIQQ 350
    GSIDVATYLS SAIAEMGPFE LVSKGDTIPV FAWKLKDGYT DKWSLYDLSD 400
    RLRLKGWLVP AYPMADGLAD WTLQRIVVRA GLSHDLATAL LTDLESEVAF 450
    LDQLESPMPR EGTGSHFHH 469
    Length:469
    Mass (Da):52,747
    Last modified:April 18, 2012 - v1
    Checksum:i8DC00C09F3DC7A29
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003119 Genomic DNA. Translation: AFA74414.1.
    RefSeqiWP_006368665.1. NC_016906.1.
    YP_005283780.1. NC_016906.1.

    Genome annotation databases

    EnsemblBacteriaiAFA74414; AFA74414; GPOL_c34020.
    GeneIDi11783406.
    KEGGigpo:GPOL_c34020.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003119 Genomic DNA. Translation: AFA74414.1 .
    RefSeqi WP_006368665.1. NC_016906.1.
    YP_005283780.1. NC_016906.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFA74414 ; AFA74414 ; GPOL_c34020 .
    GeneIDi 11783406.
    KEGGi gpo:GPOL_c34020.

    Phylogenomic databases

    KOi K01580.

    Enzyme and pathway databases

    BioCyci GPOL1112204:GJWY-3394-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Involvement of two latex-clearing proteins during rubber degradation and insights into the subsequent degradation pathway revealed by the genome sequence of Gordonia polyisoprenivorans strain VH2."
      Hiessl S., Schuldes J., Thurmer A., Halbsguth T., Broker D., Angelov A., Liebl W., Daniel R., Steinbuchel A.
      Appl. Environ. Microbiol. 78:2874-2887(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 44266 / VH2Imported.

    Entry informationi

    Entry nameiH6MZ78_GORPV
    AccessioniPrimary (citable) accession number: H6MZ78
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2012
    Last sequence update: April 18, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3