H6MZ78 (H6MZ78_GORPV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase GadB EMBL AFA74414.1
EC=4.1.1.15 EMBL AFA74414.1

Gene names

Name:	gadB EMBL AFA74414.1
Ordered Locus Names:	GPOL_c34020 EMBL AFA74414.1

Organism

Gordonia polyisoprenivorans (strain DSM 44266 / VH2) [Complete proteome] [HAMAP] EMBL AFA74414.1

Taxonomic identifier

1112204 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Gordoniaceae › Gordonia › Gordonia polyisoprenivorans

Protein attributes

Sequence length	469 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL AFA74414.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H6MZ78 [UniParc]. Last modified April 18, 2012. Version 1. Checksum: 8DC00C09F3DC7A29	FASTA	469	52,747
	10 20 30 40 50 60 MTKRKHTNAR ATTNLNDSLT VNPVFVRPGE ATEYPKFAIP ESMSLPETAY QIVHDEAMLD 70 80 90 100 110 120 GNARLNLATF VSTWMDDEAR RLYAETYDKN MIDKDEYPQT AAIEDRCWKI IADLWHVPDV 130 140 150 160 170 180 DKSIGTSTIG SSEAAMLGGL ALKRHWQARR KAEGKSIEKP NLVLSTAVQV CWEKFLNYFE 190 200 210 220 230 240 VEPRWVPVSQ EHFVFDGHEL ETYVDENTIG VVAILGVTYN GLYEPVQQIS AKLDEIEKNT 250 260 270 280 290 300 GLDVKIHVDG ASGAMVAPFC QPDLEWDFRV SRVVSINTSG HKYGLVYPGL GWIVWRDSEA 310 320 330 340 350 360 LPESMVFHCS YLGGDMPTLA LNFSRPGAQV LLQYYNFLRL GREGYRLIQQ GSIDVATYLS 370 380 390 400 410 420 SAIAEMGPFE LVSKGDTIPV FAWKLKDGYT DKWSLYDLSD RLRLKGWLVP AYPMADGLAD 430 440 450 460 WTLQRIVVRA GLSHDLATAL LTDLESEVAF LDQLESPMPR EGTGSHFHH

References

[1]

"Involvement of two latex-clearing proteins during rubber degradation and insights into the subsequent degradation pathway revealed by the genome sequence of Gordonia polyisoprenivorans strain VH2." Hiessl S., Schuldes J., Thurmer A., Halbsguth T., Broker D., Angelov A., Liebl W., Daniel R., Steinbuchel A. Appl. Environ. Microbiol. 78:2874-2887(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44266 / VH2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003119 Genomic DNA. Translation: AFA74414.1.
RefSeq	YP_005283780.1. NC_016906.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AFA74414; AFA74414; GPOL_c34020.
GeneID	11783406.
KEGG	gpo:GPOL_c34020.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

H6MZ78_GORPV

Accession

Primary (citable) accession number: H6MZ78

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2012
Last sequence update:	April 18, 2012
Last modified:	April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)