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H6MJX8

- H6MJX8_ECOLX

UniProt

H6MJX8 - H6MJX8_ECOLX

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Protein
Submitted name:

Alpha-amylase

Gene
malS, ECO55CA74_20650
Organism
Escherichia coli O55:H7 str. RM12579
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciECOL1048689:GLD6-4135-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:ECO55CA74_20650Imported
OrganismiEscherichia coli O55:H7 str. RM12579Imported
Taxonomic identifieri1048689 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000007173: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliH6MJX8.

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

H6MJX8-1 [UniParc]FASTAAdd to Basket

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MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT    50
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT 100
PTLMISIQNA AEPVANLVRE CPKWDGLPLT LDVRATFPEG AAVRDYYSQQ 150
IAIVKNGQIT LQPAATSNGL LLLERAETDA SAPFDWHNAT VYFVLTDRFE 200
NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 300
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW 350
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
LAFLPDIKTE STTASGLPVF YKNKTDTHAK AIDGFTPRDY LTHWLSQWVR 450
DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCIAQ MDTTWQQMAE 550
KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT 650
LSLKQGYGFV REHGDDKVLV IWAGQQ 676
Length:676
Mass (Da):75,745
Last modified:April 18, 2012 - v1
Checksum:i531D357458F84033
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003109 Genomic DNA. Translation: AEZ42682.1.
RefSeqiWP_000761250.1. NC_017656.1.
YP_006161237.1. NC_017656.1.

Genome annotation databases

EnsemblBacteriaiAEZ42682; AEZ42682; ECO55CA74_20650.
GeneIDi12661666.
KEGGielr:ECO55CA74_20650.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003109 Genomic DNA. Translation: AEZ42682.1 .
RefSeqi WP_000761250.1. NC_017656.1.
YP_006161237.1. NC_017656.1.

3D structure databases

ProteinModelPortali H6MJX8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEZ42682 ; AEZ42682 ; ECO55CA74_20650 .
GeneIDi 12661666.
KEGGi elr:ECO55CA74_20650.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci ECOL1048689:GLD6-4135-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Escherichia coli Serotype O55:H7 Diversity Supports Parallel Acquisition of Bacteriophage at Shiga Toxin Phage Insertion Sites during Evolution of the O157:H7 Lineage."
    Kyle J.L., Cummings C.A., Parker C.T., Quinones B., Vatta P., Newton E., Huynh S., Swimley M., Degoricija L., Barker M., Fontanoz S., Nguyen K., Patel R., Fang R., Tebbs R., Petrauskene O., Furtado M., Mandrell R.E.
    J. Bacteriol. 194:1885-1896(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RM12579Imported.

Entry informationi

Entry nameiH6MJX8_ECOLX
AccessioniPrimary (citable) accession number: H6MJX8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 3, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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