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H6M557 (H6M557_CORPS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:icd EMBL AFB71802.1
ORF Names:Cp316_0480 EMBL AFB71802.1
OrganismCorynebacterium pseudotuberculosis 316 [Complete proteome] EMBL AFB71802.1
Taxonomic identifier1074485 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium

Protein attributes

Sequence length736 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region130 – 1378Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3451Magnesium or manganese By similarity
Metal binding5431Magnesium or manganese By similarity
Metal binding5471Magnesium or manganese By similarity
Binding site1431Substrate By similarity PIRSR PIRSR009407-2
Binding site5421Substrate By similarity PIRSR PIRSR009407-2
Site2521Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4151Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
H6M557 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: AF23E678C43123CC

FASTA73679,873
        10         20         30         40         50         60 
MAKIIYTRTD EAPLLATYSL KPVVEAFAST AGIEVETRDI SLAGRILSQF PEFLTEDQKV 

        70         80         90        100        110        120 
EDALAELGEL AKTPEANIIK LPNISASVPQ LKAAVTELQS QGYKLPDYPD SPSTEEEKDI 

       130        140        150        160        170        180 
RARYDAVKGS AVNPVLREGN SDRRAPIAVK NFAKKHPHRM GAWSADSKTN VVTMESNDFR 

       190        200        210        220        230        240 
HNEKSVIIPD NDTLTIKLVT DNGEKVLKDG LKVLKGEVVD GTFISARALD EFLADQVKRA 

       250        260        270        280        290        300 
KDEGVLFSAH LKATMMKVSD PIIFGHVVRA YFADVFAKYG EQLEAAGLNG ENGLAAIYSG 

       310        320        330        340        350        360 
LESLPNGTEI KAAFDEALES GADIAMVNSA KGITNLHVPS DVIIDASMPA MIRTSGHMWN 

       370        380        390        400        410        420 
KNDEEQDTLA VIPDSSYAGV YQTVIADCKK NGAFDPTTMG TVPNVGLMAQ KAEEYGSHDK 

       430        440        450        460        470        480 
TFKIEANGTV QVVSSAGEVL IEHNVEAGDI WRACQAKDAP IQDWVKLAVT RSRLSGMPAV 

       490        500        510        520        530        540 
FWLDPERAHD RNLAALVEKY LADHDTEGLD IHIMSPVEAT QFSIDRIRRG EDTISVTGNV 

       550        560        570        580        590        600 
LRDYNTDLFP ILELGTSAKM LSVVPLMAGG GLFETGAGGS APKHVQQLVE ENHLRWDSLG 

       610        620        630        640        650        660 
EFLALAESLR HFANTEGNTK AGILADTLDR ATETLLNEGY SPSRKAGEID NRGSHFFLTK 

       670        680        690        700        710        720 
FWAKELSIQS EDADLAATFT PVAEALETHS EDIADALLAV QGTPADLGGY YHPDDAKTTA 

       730 
VMRPVASYND IISSIK 

« Hide

References

[1]"Genome Sequence of the Corynebacterium pseudotuberculosis Cp316 Strain, Isolated from the Abscess of a Californian Horse."
Ramos R.T., Silva A., Carneiro A.R., Pinto A.C., Soares Sde C., Santos A.R., Almeida S.S., Guimaraes L.C., Aburjaile F.F., Barbosa E.G., Dorella F.A., Rocha F.S., Cerdeira L.T., Barbosa M.S., Tauch A., Edman J., Spier S., Miyoshi A., Schneider M.P., Azevedo V.
J. Bacteriol. 194:6620-6621(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 316 EMBL AFB71802.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003077 Genomic DNA. Translation: AFB71802.1.
RefSeqYP_005303084.1. NC_016932.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFB71802; AFB71802; Cp316_0480.
GeneID11891839.
KEGGcpg:Cp316_0480.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00031.

Enzyme and pathway databases

BioCycCPSE1074485:GLBT-496-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH6M557_CORPS
AccessionPrimary (citable) accession number: H6M557
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)