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H6M2E7 (H6M2E7_CORPS) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118 EMBL AFB71676.1
ORF Names:Cp316_0347 EMBL AFB71676.1
OrganismCorynebacterium pseudotuberculosis 316 EMBL AFB71676.1
Taxonomic identifier1074485 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium ›

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding83 – 875GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding138 – 1414GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
H6M2E7 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: C7097DB776C1CE9E

FASTA39644,001
        10         20         30         40         50         60 
MAKAKFERTK PHVNIGTIGH VDHGKTTTTA AITKVLADAY PDLNEAFAFD AIDKAPEEKE 

        70         80         90        100        110        120 
RGITINISHV EYQTEKRHYA HVDAPGHADY IKNMITGAAQ MDGAILVVAA TDGPMPQTRE 

       130        140        150        160        170        180 
HVLLARQVGV PYILVALNKC DMVDDEEIIE LVEMEIRELL AEQDYDEEAP IIHISALKAL 

       190        200        210        220        230        240 
EGDEEWTKSI LELMQACDDS IPDPERETDK PFLMPIEDIF TITGRGTVVT GRVERGQLNV 

       250        260        270        280        290        300 
NEDVEIIGIK EKSTQTTVTG IEMFRKLLDY TEAGDNCGLL LRGIKREDVE RGQVVVKPGA 

       310        320        330        340        350        360 
YTPHTEFEGS VYVLSKDEGG RHTPFFDNYR PQFYFRTTDV TGVVKLPEGT EMVMPGDNVD 

       370        380        390 
MSVTLIQPVA MDEGLRFAIR EGSRTVGAGR VTKIIK

« Hide

References

[1]"Genome Sequence of the Corynebacterium pseudotuberculosis Cp316 Strain, Isolated from the Abscess of a Californian Horse."
Ramos R.T., Silva A., Carneiro A.R., Pinto A.C., Soares Sde C., Santos A.R., Almeida S.S., Guimaraes L.C., Aburjaile F.F., Barbosa E.G., Dorella F.A., Rocha F.S., Cerdeira L.T., Barbosa M.S., Tauch A., Edman J., Spier S., Miyoshi A., Schneider M.P., Azevedo V.
J. Bacteriol. 194:6620-6621(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 316 EMBL AFB71676.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003077 Genomic DNA. Translation: AFB71676.1.
RefSeqYP_005302958.1. NC_016932.1.

3D structure databases

ProteinModelPortalH6M2E7.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFB71676; AFB71676; Cp316_0347.
GeneID11891706.
KEGGcpg:Cp316_0347.

Phylogenomic databases

KOK02358.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameH6M2E7_CORPS
AccessionPrimary (citable) accession number: H6M2E7
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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