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H6L8E0

- H6L8E0_SAPGL

UniProt

H6L8E0 - H6L8E0_SAPGL

Protein

Thymidine kinase

Gene

tdk

Organism
Saprospira grandis (strain Lewin)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (18 Apr 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + thymidine = ADP + thymidine 5'-phosphate.

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. thymidine kinase activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    KinaseUniRule annotationImported, Transferase

    Keywords - Biological processi

    DNA synthesisUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciSGRA984262:GLJW-3827-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Thymidine kinaseUniRule annotation (EC:2.7.1.21UniRule annotation)
    Gene namesi
    Name:tdkImported
    Ordered Locus Names:SGRA_3788Imported
    OrganismiSaprospira grandis (strain Lewin)Imported
    Taxonomic identifieri984262 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSaprospiraceaeSaprospira
    ProteomesiUP000007519: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the thymidine kinase family.UniRule annotation

    Phylogenomic databases

    KOiK00857.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR027417. P-loop_NTPase.
    IPR001267. Thymidine_kinase.
    [Graphical view]
    PANTHERiPTHR11441. PTHR11441. 1 hit.
    PfamiPF00265. TK. 1 hit.
    [Graphical view]
    PIRSFiPIRSF035805. TK_cell. 1 hit.
    SUPFAMiSSF52540. SSF52540. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    H6L8E0-1 [UniParc]FASTAAdd to Basket

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    MNGKLHLILG PMFSGKSTLL LTRYRRYRIA GKACLLVKYA KDCRYDDSAA    50
    MIVTHDKLRY EATACTKLAE LDDLVQDYDV ICIDEIQFYP DAADFADRWA 100
    NQGKIVECCG LSGDYKREPF EQISRLIPRC DDITHVKAVC KSSGLDAPFS 150
    QRFSQEEEQE VIGGSDKYQA VSRAVYLQQQ KKED 184
    Length:184
    Mass (Da):20,952
    Last modified:April 18, 2012 - v1
    Checksum:i7E1C6D82DF5C0043
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002831 Genomic DNA. Translation: AFC26504.1.
    RefSeqiYP_005324088.1. NC_016940.1.

    Genome annotation databases

    EnsemblBacteriaiAFC26504; AFC26504; SGRA_3788.
    GeneIDi11924459.
    KEGGisgn:SGRA_3788.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002831 Genomic DNA. Translation: AFC26504.1 .
    RefSeqi YP_005324088.1. NC_016940.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFC26504 ; AFC26504 ; SGRA_3788 .
    GeneIDi 11924459.
    KEGGi sgn:SGRA_3788.

    Phylogenomic databases

    KOi K00857.

    Enzyme and pathway databases

    BioCyci SGRA984262:GLJW-3827-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR027417. P-loop_NTPase.
    IPR001267. Thymidine_kinase.
    [Graphical view ]
    PANTHERi PTHR11441. PTHR11441. 1 hit.
    Pfami PF00265. TK. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF035805. TK_cell. 1 hit.
    SUPFAMi SSF52540. SSF52540. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium."
      Saw J., Yuryev A., Kanbe M., Hou S., Young A., Aizawa S., Alam M.
      Stand. Genomic Sci. 6:84-93(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: LewinImported.

    Entry informationi

    Entry nameiH6L8E0_SAPGL
    AccessioniPrimary (citable) accession number: H6L8E0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2012
    Last sequence update: April 18, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3