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H6L0B4 (H6L0B4_SAPGL) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ion transport protein EMBL AFC26278.1
Gene names
Ordered Locus Names:SGRA_3554 EMBL AFC26278.1
OrganismSaprospira grandis (strain Lewin) [Complete proteome] [HAMAP] EMBL AFC26278.1
Taxonomic identifier984262 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Saprospiraceae › Saprospira ›

Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Biological processIon transport
Transport
   Cellular componentMembrane
   DomainTransmembrane RuleBase RU003378
   Molecular functionIon channel RuleBase RU003378
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentvoltage-gated potassium channel complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionvoltage-gated potassium channel activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H6L0B4 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: BE2C2B48DDECA352

FASTA32836,995
        10         20         30         40         50         60 
MSVATNKKSL RRHIFDVIDL EQEESSLPAR IFETSITILI ILSILAIIAE SFINYRYEGN 

        70         80         90        100        110        120 
IIDWIERSQQ NTIISHYFSL FENTTLIIFT AEFFLRLFTA DFKYPEEKSF RAAAWRFFKS 

       130        140        150        160        170        180 
SGGLIDFLAI SPFLFQLAHV DFRFLRALKI SRLLRVLKLS SLTRSIVIVG DVFIDKRNEL 

       190        200        210        220        230        240 
GITLFVTFVM LLVSSTLMWY VEGNVQPRAF PNIIATFWWA IATLTTVGYG DVFPITSAGK 

       250        260        270        280        290        300 
LLSGIIAILG IGIVALPAGI LSSAFIERLE RDPNMSLEQP NDGEEPAPES APVLAQTAND 

       310        320 
CSDQFGQKFK FCPYCGQALD QNGQHLHK

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References

[1]"Complete genome sequencing and analysis of Saprospira grandis str. Lewin, a predatory marine bacterium."
Saw J.H., Yuryev A., Kanbe M., Hou S., Young A.G., Aizawa S., Alam M.
Stand. Genomic Sci. 6:84-93(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Lewin EMBL AFC26278.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002831 Genomic DNA. Translation: AFC26278.1.
RefSeqYP_005323862.1. NC_016940.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFC26278; AFC26278; SGRA_3554.
GeneID11924231.
KEGGsgn:SGRA_3554.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK10716.

Enzyme and pathway databases

BioCycSGRA984262:GLJW-3600-MONOMER.

Family and domain databases

InterProIPR005821. Ion_trans_dom.
IPR003091. K_chnl.
[Graphical view]
PANTHERPTHR11537. PTHR11537. 1 hit.
PfamPF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSPR00169. KCHANNEL.
ProtoNetSearch...

Entry information

Entry nameH6L0B4_SAPGL
AccessionPrimary (citable) accession number: H6L0B4
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: May 29, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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