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Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Gordonia terrae NBRC 100016
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandCopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
ORF Names:GOTRE_140_00100Imported
OrganismiGordonia terrae NBRC 100016Imported
Taxonomic identifieri1089454 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesGordoniaceaeGordonia
Proteomesi
  • UP000004881 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500359997228 – 226Superoxide dismutase [Cu-Zn]Sequence analysisAdd BLAST199

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini76 – 222Sod_CuInterPro annotationAdd BLAST147

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

OrthoDBiPOG091H05EB.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiView protein in InterPro
IPR036423. SOD-like_Cu/Zn_dom_sf.
IPR024134. SOD_Cu/Zn_/chaperone.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiView protein in Pfam
PF00080. Sod_Cu. 1 hit.
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiView protein in PROSITE
PS00332. SOD_CU_ZN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

H5UJM7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGRSKLAAP RALAALVSAG LIGVALAGCS PDQEPTDVPG TTPPVVSDAP
60 70 80 90 100
LPPGAEDDVD SEPSGQIAVA EIKDTSGDVV GQATITAASE TAEPVTINVR
110 120 130 140 150
VTAGDLPAGF HGMHIHENGT CDAGAGGSQA FTSAGGHLQV DGNTSHPSSG
160 170 180 190 200
DLISINILED HTGRTVTTTD AVNLQQLIGK SIMIHEKPDN FGNIPADKYP
210 220
GGANPDTLKT GDAGARIACG VIEEQS
Length:226
Mass (Da):22,660
Last modified:April 18, 2012 - v1
Checksum:i737C4A35279C94F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BAFD01000106 Genomic DNA. Translation: GAB45935.1.
RefSeqiWP_004022815.1. NZ_BAFD01000106.1.

Genome annotation databases

EnsemblBacteriaiGAB45935; GAB45935; GOTRE_140_00100.
GeneIDi32686782.

Similar proteinsi

Entry informationi

Entry nameiH5UJM7_9ACTN
AccessioniPrimary (citable) accession number: H5UJM7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: November 22, 2017
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported