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H5T0P1 (H5T0P1_LACLL) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:amyY EMBL BAL51655.1
ORF Names:lilo_1658 EMBL BAL51655.1
OrganismLactococcus lactis subsp. lactis IO-1 [Complete proteome] EMBL BAL51655.1
Taxonomic identifier1046624 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus

Protein attributes

Sequence length524 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
H5T0P1 [UniParc].

Last modified April 18, 2012. Version 1.
Checksum: B138CACA87422444

FASTA52457,638
        10         20         30         40         50         60 
MKNKLLLLSV TLLATCALSA CQKANSKDSS VKKVAVSQKV DRSLYRNFYE IFTSSFADSN 

        70         80         90        100        110        120 
HDGEGDLNGV TQHLDYLNTG KSNSTTDLKV QGLWMTPIFA SPSYHGYDVT NYEEINPKFG 

       130        140        150        160        170        180 
TMADFENLIA QAKKRGIAVI LDMPFNHTAT DNVWFQKALA GDKKYVAYYN WSDTAKEGYS 

       190        200        210        220        230        240 
LASNGKYYES EFDKSMPDLN LANPEVKKEI AKITKFWLDK GVSGFRLDAV GFYFSNDDKK 

       250        260        270        280        290        300 
TTAFTKWLTD TVKKQNPKAY LVGEVFSTAS AIDDIYPSGI DSLFDFPNAL QSSSSPINSA 

       310        320        330        340        350        360 
LVLGEGSLFG QQIEAWDQEI HADNPKAIDA PFLSNHDTDR SATLLSSLSM QKMAAQTYLL 

       370        380        390        400        410        420 
MPGNPFIYYG EELGLTGSGI DQNKRLPMPW NAAGTDSPKA DISVPGATEI ATTDGGSVAQ 

       430        440        450        460        470        480 
QEANPNSLLN WYKKILRVKA KYPEIATDRL KNISVSEESL SVINYGKDLT IINNFSDTEN 

       490        500        510        520 
VTMKLPKSVV GTKITDQLSV SSSQAKLTDG KLTIPAYSTV ILKK 

« Hide

References

[1]"Complete Genome Sequence of Lactococcus lactis IO-1, a Lactic Acid Bacterium That Utilizes Xylose and Produces High Levels of L-Lactic Acid."
Kato H., Shiwa Y., Oshima K., Machii M., Araya-kojima T., Zendo T., Shimizu-kadota M., Hattori M., Sonomoto K., Yoshikawa H.
J. Bacteriol. 194:2102-2103(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IO-1 EMBL BAL51655.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012281 Genomic DNA. Translation: BAL51655.1.
RefSeqYP_007508981.1. NC_020450.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL51655; BAL51655; lilo_1658.
GeneID14678906.
KEGGlls:lilo_1658.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameH5T0P1_LACLL
AccessionPrimary (citable) accession number: H5T0P1
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)