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Protein
Submitted name:

Alpha-amylase

Gene

amyY

Organism
Lactococcus lactis subsp. lactis IO-1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:amyYImported
ORF Names:lilo_1658Imported
OrganismiLactococcus lactis subsp. lactis IO-1Imported
Taxonomic identifieri1046624 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
ProteomesiUP000008189 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

H5T0P1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNKLLLLSV TLLATCALSA CQKANSKDSS VKKVAVSQKV DRSLYRNFYE
60 70 80 90 100
IFTSSFADSN HDGEGDLNGV TQHLDYLNTG KSNSTTDLKV QGLWMTPIFA
110 120 130 140 150
SPSYHGYDVT NYEEINPKFG TMADFENLIA QAKKRGIAVI LDMPFNHTAT
160 170 180 190 200
DNVWFQKALA GDKKYVAYYN WSDTAKEGYS LASNGKYYES EFDKSMPDLN
210 220 230 240 250
LANPEVKKEI AKITKFWLDK GVSGFRLDAV GFYFSNDDKK TTAFTKWLTD
260 270 280 290 300
TVKKQNPKAY LVGEVFSTAS AIDDIYPSGI DSLFDFPNAL QSSSSPINSA
310 320 330 340 350
LVLGEGSLFG QQIEAWDQEI HADNPKAIDA PFLSNHDTDR SATLLSSLSM
360 370 380 390 400
QKMAAQTYLL MPGNPFIYYG EELGLTGSGI DQNKRLPMPW NAAGTDSPKA
410 420 430 440 450
DISVPGATEI ATTDGGSVAQ QEANPNSLLN WYKKILRVKA KYPEIATDRL
460 470 480 490 500
KNISVSEESL SVINYGKDLT IINNFSDTEN VTMKLPKSVV GTKITDQLSV
510 520
SSSQAKLTDG KLTIPAYSTV ILKK
Length:524
Mass (Da):57,638
Last modified:April 18, 2012 - v1
Checksum:iB138CACA87422444
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012281 Genomic DNA. Translation: BAL51655.1.
RefSeqiWP_015426865.1. NC_020450.1.

Genome annotation databases

EnsemblBacteriaiBAL51655; BAL51655; lilo_1658.
KEGGills:lilo_1658.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012281 Genomic DNA. Translation: BAL51655.1.
RefSeqiWP_015426865.1. NC_020450.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAL51655; BAL51655; lilo_1658.
KEGGills:lilo_1658.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of Lactococcus lactis IO-1, a Lactic Acid Bacterium That Utilizes Xylose and Produces High Levels of L-Lactic Acid."
    Kato H., Shiwa Y., Oshima K., Machii M., Araya-kojima T., Zendo T., Shimizu-kadota M., Hattori M., Sonomoto K., Yoshikawa H.
    J. Bacteriol. 194:2102-2103(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IO-1Imported.

Entry informationi

Entry nameiH5T0P1_LACLL
AccessioniPrimary (citable) accession number: H5T0P1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: July 22, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.