H3HMH1 (H3HMH1_STRPU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Uncharacterized protein EnsemblMetazoa SPU_002857tr
Organism	Strongylocentrotus purpuratus (Purple sea urchin) [Reference proteome] EnsemblMetazoa SPU_002857tr
Taxonomic identifier	7668 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Echinodermata › Eleutherozoa › Echinozoa › Echinoidea › Euechinoidea › Echinacea › Echinoida › Strongylocentrotidae › Strongylocentrotus

Protein attributes

Sequence length	614 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	H3HMH1 [UniParc]. Last modified April 18, 2012. Version 1. Checksum: B5D4D3E3B54F7DAB	FASTA	614	68,949
	10 20 30 40 50 60 MPLVTRLSGE GVILSDSNRI ETVEEDEELE TIPRSPPTRE NGGVVDAGGG SDGGDGEEDD 70 80 90 100 110 120 ADVSGGGGVH QNRAMRLLQD RRRLVDRTVS EGQLRIVPVG LRVRSKSTDD DGERPDFFEL 130 140 150 160 170 180 RAKDLLPCKG ASGITVKFLK EMHDILVEYV EESYDRSTKI LEFNHPHDLR EKLHLELPDK 190 200 210 220 230 240 AENLDQILND CRNTLKYCVH TGHPRFFNQI SQGLDIVSMA GEWLTATANT NMFTYEIAPV 250 260 270 280 290 300 FVLMERATLK KMREIVGYKD GDGIFAPGGA VCNLYAVLAA RHKFFPACKR RGMFGVPNLV 310 320 330 340 350 360 MFTSEQSHFS IKRAASILGI GTDNLILVET DARGKMSADD LENKVQQAIG RGEKPFFVNA 370 380 390 400 410 420 TAGTTVVGAY DPINKIADIC SKYNLWMHVD AAWGGGALLS RKHRHKVDGV SRADSVTWNP 430 440 450 460 470 480 HKMMGITLQC AAVLFKEDGL LEDCNSMRAP YLFQQDKHYD VSFDTGDKTI QCGRHVDVFK 490 500 510 520 530 540 LWLTWRSKGT RGYEAQINKL FDLAQYLVDR IKAKEGFELV YDKPELTNVC FWYYPPSLRE 550 560 570 580 590 600 MENCQEKQLK LHKVAPEIKA MMMNKGTVMV GYQPLGSKVN FFRMIVNNTA STKADIDFML 610 DEIERLGKPL TWDA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Deng J., Liu Y., Angeri F., Arias F., Bandaranaike D., Bess C., Blankenburg K., Chen D., Deiros R.D.R., Denson S., Dinh H., Francisco L., Fu Q., Gubbala S., Han Y., Hiang H., Javaid M., Jayaseelan J.C. , Jing C., Jones J., Korchina V., Lara F., Lee S., Li H., Mims S., Munidasa M., Ngo R., Nguyen L., Ongeri F., Osuji N., Palculict T., Patil S., Paul S., Pellon M., Perales L., Pu L., Puazo M., Qin X., Qu C., Raj R., Saada N., Shafer J., Shah N., Song H., Tang L., Vee V., Wang Y., Weissenberger G., Xin Y., Nazareth L., Newsham I., Wang M., Wu Y., Worley K.C., Reid J.G., Han Y., Muzny D.M., Gibbs R. Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	EnsemblMetazoa Submitted (DEC-2012) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
RefSeq	XP_784856.1. XM_779763.2.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	SPU_002857tr; SPU_002857tr; SPU_002857gn.
GeneID	579659.
KEGG	spu:579659.
Phylogenomic databases
KO	K01580.
OMA	ISMAGEW.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR021115. Pyridoxal-P_BS. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

H3HMH1_STRPU

Accession

Primary (citable) accession number: H3HMH1

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2012
Last sequence update:	April 18, 2012
Last modified:	March 6, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)