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Protein
Submitted name:

Uncharacterized protein

Gene

WBGene00096533

Organism
Pristionchus pacificus (Parasitic nematode)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:WBGene00096533Imported
OrganismiPristionchus pacificus (Parasitic nematode)Imported
Taxonomic identifieri54126 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaDiplogasteridaNeodiplogasteridaePristionchus
Proteomesi
  • UP000005239 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi54126.PPA06979

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 227NR LBDInterPro annotationAdd BLAST224

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Phylogenomic databases

eggNOGiKOG4215 Eukaryota
ENOG410XQT8 LUCA
InParanoidiH3EB83
OrthoDBiEOG091G06RK

Family and domain databases

InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PRINTSiPR00398 STRDHORMONER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit

Sequencei

Sequence statusi: Complete.

H3EB83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKEEGRVAQ VITKAESNIR GSEKSHGAFP DSPDSRSASQ RAVANLIGWT
60 70 80 90 100
SALHPIPELP FDDRVRVMKH ATAAFTLLSI AQRSLNLPHL ILPNDNVLSL
110 120 130 140 150
STLHASLMRP LQRVSEELQQ PLRRLRVEHT ELCALKAIVL LSPDIPEISH
160 170 180 190 200
IGRERLREAR DSLLRALFSF LSTAHGAMDA SLRVSSLMLV LPPLFSLAST
210 220 230 240 250
LSDHPVLATI LGLNEDERAS PSAPSMQSSF LATTASPPAP LTPQNNNNNN
260 270 280 290 300
NNSSFPSSLT PSMDGSASPP FSMQNSASLL AGLLAQQPAL LSSLVQQHQQ
310 320 330 340 350
MGSLPSSLSP PVSLPQLFGL IHRGGQPSAR EDSLLVKITP ITPVIPPLHL

R
Length:351
Mass (Da):37,771
Last modified:April 18, 2012 - v1
Checksum:i2636823502BCB6A4
GO

Genome annotation databases

EnsemblMetazoaiPPA06979; PPA06979; PPA06979

Entry informationi

Entry nameiH3EB83_PRIPA
AccessioniPrimary (citable) accession number: H3EB83
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: May 23, 2018
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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