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Protein
Submitted name:

Uncharacterized protein

Gene

WBGene00092107

Organism
Pristionchus pacificus (Parasitic nematode)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransportSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:WBGene00092107Imported
OrganismiPristionchus pacificus (Parasitic nematode)Imported
Taxonomic identifieri54126 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaDiplogasteridaNeodiplogasteridaePristionchus
Proteomesi
  • UP000005239 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei56 – 75HelicalSequence analysisAdd BLAST20
Transmembranei87 – 110HelicalSequence analysisAdd BLAST24
Transmembranei142 – 158HelicalSequence analysisAdd BLAST17
Transmembranei170 – 190HelicalSequence analysisAdd BLAST21
Transmembranei211 – 234HelicalSequence analysisAdd BLAST24
Transmembranei240 – 259HelicalSequence analysisAdd BLAST20
Transmembranei3069 – 3088HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi54126.PPA02553.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini872 – 1037Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1577 – 1723Helicase C-terminalInterPro annotationAdd BLAST147

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG0391. Eukaryota.
KOG1580. Eukaryota.
COG0553. LUCA.
COG0697. LUCA.
InParanoidiH3DYQ5.
OrthoDBiEOG091G045T.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
IPR013657. UAA.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
PF08449. UAA. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.

Sequencei

Sequence statusi: Complete.

H3DYQ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLHLQTGSRT LPNVLHSNFR IDLTDALFHW DSSRNSHLLG RLRVQGKYED
60 70 80 90 100
GDRFTYTQAL VFFMCVANTI FAFFMRSKRC KDNVPTPTYA LCAASYLAAM
110 120 130 140 150
MFSNMALQFL PYPTQVLAKS CKPIPVLVFG ALFAGKSYHF RKYLFVVMIV
160 170 180 190 200
AGVALFMYKD KKSKAEEGGF GWGEILLLLS LTCDGTTTAI QDRIKKSYNR
210 220 230 240 250
SSESMMLFMN LFSSLYLLVG LIATGELIGF IAFVQKYPKV FWELLLLSIA
260 270 280 290 300
GCGGQYFIFK TINEFSPLTC SIVTTTRKLF TIIISVMFMN HPLSERQIMG
310 320 330 340 350
MVVVFTGLAL DAVDSKRQTD IPHYLDEFRP VNQFQLCLTN TLNDIQVVCD
360 370 380 390 400
RGLHNNQWFV ECTIVTFFDQ LPFQNVEEED VLATHLLAAA LAQIRQRRDH
410 420 430 440 450
ISHDMIRDVN LAEETAKQKM EKIDTSVSRL ENNSVGALES LLKDPQYGFP
460 470 480 490 500
TKSKPASPSK LKVAAPTEVK EEETTTDQPC FSGSAENVLT VNTSASQPNG
510 520 530 540 550
PDTVEKAAKH LSTTIARQAR EKQAEIEKAE IRVVKDHRRS CAMIARMVKD
560 570 580 590 600
FWLNVDKVVD HRKQVIIESK KRKALDQHLQ FIVGEADKLS QVVAEGIVAE
610 620 630 640 650
TSSKTPSLQG KDDDQDDKDF SSDESDYDDE TTIAKAEKQL NNVDVKGEVD
660 670 680 690 700
ALGKEADMEF DDLLDSLPPE YLASLGITVP STSKKSAADA NQEEEEEEEE
710 720 730 740 750
DSEDSEDDED SEDEPHNRPS SSKSVEEKET KEEESDEEPR AKRKKIVEEE
760 770 780 790 800
DDGNGKNDDF ESRDEKMRTS REKSKEEGEE EDVKMEDDDG EKEDAREAES
810 820 830 840 850
QEKVKLDNVD FAKLKSDNSD ERQQELTHIA EEALKFQPKG YTLETTQVKT
860 870 880 890 900
GVPHMLRGTL REYQMVGLDW LVTLYDKNLN GILADEMGLG KTIQTVALLA
910 920 930 940 950
HLACSERIWG PHLIVVPTSV ILNWEMEFKK WCPALKILTY FGSVKERAEK
960 970 980 990 1000
RKGWMKDDSF HVCITSYKVI TTDIRSFKMR SWQYLILDEA QNIKNWKSQR
1010 1020 1030 1040 1050
WQTLLNVRAR RRLLLTGTPL QNSLMELWSL LHFLMPAIFA SHDDFKDWFS
1060 1070 1080 1090 1100
NPLTGMMEGS VEFNKGLLDR LHKVLRPFIL RRMKAEVEKQ LPSKTEHVVK
1110 1120 1130 1140 1150
CPLSKRQRYL YDDFMSQRAT RENLKSGNMM SVLNIVMQLR KCCNHPNLFT
1160 1170 1180 1190 1200
PREEQTPLVV PSIATVFPAC VFDIVSDDPL QDCVKEIPQS LNLANRKAAW
1210 1220 1230 1240 1250
RTSIPKTRPH VEELLTMEPA LHIPKKVPGF HFVRPMPEKS ISQVSQSSRA
1260 1270 1280 1290 1300
PEMFLVVEEG NDIGGLLKER VQVTVDGDKV MVNTDGKLGA ERIRVCQAVP
1310 1320 1330 1340 1350
GGSFADVDGD SNGRRTSWKG SGGLAPPPSL AIRESGATPS VSTTSIDSKR
1360 1370 1380 1390 1400
SSTSVYSHRR PVAAAHSPIR STTVLHSQPT NRVVMNGEEK KGRNFNELMQ
1410 1420 1430 1440 1450
EGALSPIPNF PIPLSPPLKR RKTERPLVTG PYQELVSRER LSILEEERRN
1460 1470 1480 1490 1500
RLEKAVMRFD EEEEPMYSWQ LMSVLWRETR TTRRKGNQWR PSFWKGEWEE
1510 1520 1530 1540 1550
LGEKVREECE EMTKKFVIYV DGALTESPKI NIMMPSFRLL SDCDPLVNSN
1560 1570 1580 1590 1600
LVAHRMQLPE VRLIEYDCGK LQILAKLLRE LYIYKHRCLI FTQMSRMLDV
1610 1620 1630 1640 1650
LQAFLSHHGY QYFRLDGTTG IEQRQAMMER FNADSRVFCF ILSTRSGGVG
1660 1670 1680 1690 1700
VNLTGADTVI FYDSDWNPTM DAQAQDRCHR IGQTRNVSIY RLISEKTIEE
1710 1720 1730 1740 1750
NILKKAMQKR RLGEMAIDEA GFTPDFFRQK DNIRDLFDGE NVEDLEVDTP
1760 1770 1780 1790 1800
VDAPSNQLEL DKAMASLEDE QDVAAAKIVR SEAKADIKEF DERVGGVTVI
1810 1820 1830 1840 1850
GGGDDGELGE LLGQLKPIEK YAIKFLEAEY KPEFEEEVKE AEALLHQKKQ
1860 1870 1880 1890 1900
EWNRAHERAM REEEGAEGGM DPSLSSLNRD ISIDEARRPR PRYTPSTLIP
1910 1920 1930 1940 1950
SRQSSRIHEN IQSAKRVSHS LASSSYISDS SPSLSHSTPR RVLVRPPINP
1960 1970 1980 1990 2000
TQRAARSVLK KAVRKRGRPP KPKEPKNEDD DEDYEDEGST ADEDGVSMKR
2010 2020 2030 2040 2050
GRGRPRKNPI PSSQSQSPIP PLLSPSISLS SPSTSTSTPA PPRRMVPIVR
2060 2070 2080 2090 2100
PSLPSTRPIP FNSSPSAGSS RSSSISSSSP RITQFTQPYN RQSIAASPLT
2110 2120 2130 2140 2150
RTPLPNARQS MVNRPLSSTS SSSLRLPVRP LAHPHSHLTS PSSGGSPTSS
2160 2170 2180 2190 2200
PYRLPVRIVH PNISPSSVLR PVPSSRGSSD MGRGRGGGRG GQTTTYVSPT
2210 2220 2230 2240 2250
SSHGSRRIIV VRAPGGGGST PSPFRGTTSN SFRGGNVQGG RGNEEELFHD
2260 2270 2280 2290 2300
FDVLFEDQFM PTWRPLTPPL SDLDEDLYSD EFSNQFYEEY LMEDNELPST
2310 2320 2330 2340 2350
IHELPRPLNK YSHSPIKKQR DNSHSAVLEL LNAASPIVSA EHAAAEAQKN
2360 2370 2380 2390 2400
VAMLHQSQSS TSIDLGLPPP SPMDSPSVRR TSSSSRKTVR SMYESMPGRT
2410 2420 2430 2440 2450
AKGDMRRPTT PPPAEREAKD YEGPEWTILE DYALLQAVLS EQRLTHMTQN
2460 2470 2480 2490 2500
ERSGIKLNWE YISGFVNRVT NNYRSPRQCS VHYQMAVLPR EEGRILTIDP
2510 2520 2530 2540 2550
LTKKPRKLSL TPTEISHLRK GRTSTHQQYQ NDVESVLSYK LLDKMRAVKR
2560 2570 2580 2590 2600
VREKREPPFK RVNPLEIPST GVPPSNHINK MRQWEIDPFG SFPPLHETLA
2610 2620 2630 2640 2650
AREARRSAVM MQEKEARMAH DAKMAEEREK QSIAASISSI IVRPSALPHM
2660 2670 2680 2690 2700
TGTLTTPPLI TLEVVHRVDL MREERWLELV HLPSNMLMGE EGGGEEGLPI
2710 2720 2730 2740 2750
GGDRGGPYFP RPPPHQQPIP TNPNPLLPHQ QAHPLAEHMP SMGGMTRRVG
2760 2770 2780 2790 2800
TPLGGNQGMM GSGQGGGSGG GGGSSSQYVM IGGDRGGGGE GNQQGPQGSQ
2810 2820 2830 2840 2850
GGGGGGQMGR DGGGQTQQVA SRMNLMGREG GGSSGQSSGG PSQPVYRAMS
2860 2870 2880 2890 2900
GAPPPKRAAP GGIQRMYMGD GGNPSTQTVH IARGQTVARA EMRPNFNPQR
2910 2920 2930 2940 2950
VTQRVMPGGT GSRVYMGGPG SGNASPSHGG QSMGGDGGGQ TAPTGRPYGM
2960 2970 2980 2990 3000
MQPPIRVGIQ PPRMGGPMGG NGGPPKRAHS IVPPKNQPGM LVARAGAGIG
3010 3020 3030 3040 3050
HMRGSSQINR FPGGTSGSQP RMNVLMEQPK EELLFEEEII PQEEEEGGGS
3060 3070 3080 3090
MGGPSLQSRS IPSSRPMDLL HLLHLFLLLI PLLIPFLLHK TN
Length:3,092
Mass (Da):344,682
Last modified:April 18, 2012 - v1
Checksum:i91097BF284810129
GO

Genome annotation databases

EnsemblMetazoaiPPA02553; PPA02553; PPA02553.

Entry informationi

Entry nameiH3DYQ5_PRIPA
AccessioniPrimary (citable) accession number: H3DYQ5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: October 25, 2017
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported