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Protein
Submitted name:

Synaptotagmin XVII, isoform CRA_a

Gene

SYT17

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Synaptotagmin XVII, isoform CRA_aImported
Submitted name:
Synaptotagmin-17Imported
Gene namesi
Name:SYT17Imported
ORF Names:hCG_38025Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

HGNCiHGNC:24119. SYT17.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000103528.

Expressioni

Gene expression databases

BgeeiENSG00000103528.
ExpressionAtlasiH3BRH9. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000347538.

Structurei

3D structure databases

ProteinModelPortaliH3BRH9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini135 – 233C2InterPro annotationAdd BLAST99
Domaini274 – 365C2InterPro annotationAdd BLAST92

Sequence similaritiesi

Contains 2 C2 domains.UniRule annotation

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG1028. Eukaryota.
ENOG410XRME. LUCA.
GeneTreeiENSGT00760000118973.

Family and domain databases

Gene3Di2.60.40.150. 2 hits.
InterProiIPR000008. C2_dom.
IPR001565. Synaptotagmin.
IPR014705. SYT17.
[Graphical view]
PANTHERiPTHR10024:SF251. PTHR10024:SF251. 1 hit.
PfamiPF00168. C2. 2 hits.
[Graphical view]
PRINTSiPR00399. SYNAPTOTAGMN.
SMARTiSM00239. C2. 2 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 2 hits.
PROSITEiPS50004. C2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H3BRH9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRSSDKDG DSVHTASEVP LTPRTNSPDG RRSSSDTSKS TYSLTRRISS
60 70 80 90 100
LESRRPSSPL IDIKPIEFGV LSAKKEPIQP SVLRRTYNPD DYFRKFEPHL
110 120 130 140 150
YSLDSNSDDV DSLTDEEILS KYQLGMLHFS TQYDLLHNHL TVRVIEARDL
160 170 180 190 200
PPPISHDGSR QDMAHSNPYV KICLLPDQKN SKQTGVKRKT QKPVFEERYT
210 220 230 240 250
FEIPFLEAQR RTLLLTVVDF DKFSRHCVIG KVSVPLCEVD LVKGGHWWKA
260 270 280 290 300
LIPSSQNEVE LGELLLSLNY LPSAGRLNVD VIRAKQLLQT DVSQGSDPFV
310 320 330 340 350
KIQLVHGLKL VKTKKTSFLR GTIDPFYNES FSFKVPQEEL ENASLVFTVF
360 370 380 390 400
GHNMKSSNDF IGRIVIGQYS SGPSETNHWR RMLNTHRTAV EQWHSLRSRA
410
ECDRVSPASL EVT
Length:413
Mass (Da):46,885
Last modified:April 18, 2012 - v1
Checksum:i3D75AF8F633A1A8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC003003 Genomic DNA. No translation available.
AC010494 Genomic DNA. No translation available.
KF456169 Genomic DNA. No translation available.
CH471186 Genomic DNA. Translation: EAW50273.1.
RefSeqiNP_001317438.1. NM_001330509.1.
XP_005255419.1. XM_005255362.3.
XP_011544171.1. XM_011545869.2.
XP_011544173.1. XM_011545871.2.
XP_011544174.1. XM_011545872.2.
XP_016878770.1. XM_017023281.1.
UniGeneiHs.258326.
Hs.733095.

Genome annotation databases

EnsembliENST00000562034; ENSP00000456252; ENSG00000103528.
GeneIDi51760.
UCSCiuc002dfx.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC003003 Genomic DNA. No translation available.
AC010494 Genomic DNA. No translation available.
KF456169 Genomic DNA. No translation available.
CH471186 Genomic DNA. Translation: EAW50273.1.
RefSeqiNP_001317438.1. NM_001330509.1.
XP_005255419.1. XM_005255362.3.
XP_011544171.1. XM_011545869.2.
XP_011544173.1. XM_011545871.2.
XP_011544174.1. XM_011545872.2.
XP_016878770.1. XM_017023281.1.
UniGeneiHs.258326.
Hs.733095.

3D structure databases

ProteinModelPortaliH3BRH9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000347538.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000562034; ENSP00000456252; ENSG00000103528.
GeneIDi51760.
UCSCiuc002dfx.4. human.

Organism-specific databases

CTDi51760.
HGNCiHGNC:24119. SYT17.
OpenTargetsiENSG00000103528.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1028. Eukaryota.
ENOG410XRME. LUCA.
GeneTreeiENSGT00760000118973.

Miscellaneous databases

ChiTaRSiSYT17. human.
GenomeRNAii51760.

Gene expression databases

BgeeiENSG00000103528.
ExpressionAtlasiH3BRH9. baseline and differential.

Family and domain databases

Gene3Di2.60.40.150. 2 hits.
InterProiIPR000008. C2_dom.
IPR001565. Synaptotagmin.
IPR014705. SYT17.
[Graphical view]
PANTHERiPTHR10024:SF251. PTHR10024:SF251. 1 hit.
PfamiPF00168. C2. 2 hits.
[Graphical view]
PRINTSiPR00399. SYNAPTOTAGMN.
SMARTiSM00239. C2. 2 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 2 hits.
PROSITEiPS50004. C2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiH3BRH9_HUMAN
AccessioniPrimary (citable) accession number: H3BRH9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: November 30, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.