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Protein

Secretory carrier-associated membrane protein

Gene

SCAMP2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Secretory carrier-associated membrane proteinUniRule annotation
Short name:
Secretory carrier membrane proteinUniRule annotation
Gene namesi
Name:SCAMP2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 15

Organism-specific databases

EuPathDBiHostDB:ENSG00000140497.16.
HGNCiHGNC:10564. SCAMP2.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei112 – 134HelicalUniRule annotationAdd BLAST23
Transmembranei146 – 163HelicalUniRule annotationAdd BLAST18
Transmembranei175 – 199HelicalUniRule annotationAdd BLAST25
Transmembranei219 – 243HelicalUniRule annotationAdd BLAST25

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000140497.

PTM / Processingi

Proteomic databases

MaxQBiH3BPL9.
PeptideAtlasiH3BPL9.
PRIDEiH3BPL9.

Expressioni

Gene expression databases

BgeeiENSG00000140497.
ExpressionAtlasiH3BPL9. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliH3BPL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili42 – 79Sequence analysisAdd BLAST38

Sequence similaritiesi

Belongs to the SCAMP family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000014393.

Family and domain databases

InterProiView protein in InterPro
IPR007273. SCAMP.
PANTHERiPTHR10687. PTHR10687. 1 hit.
PfamiView protein in Pfam
PF04144. SCAMP. 1 hit.

Sequencei

Sequence statusi: Fragment.

H3BPL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SETNAATTVP VTQLPGSSQP AVLQPSVEPT QPTPQAVVSA AQAGLLRQQE
60 70 80 90 100
ELDRKAAELE RKERELQNTV ANLHVRQNNW PPLPSWCPVK PCFYQDFSTE
110 120 130 140 150
IPADYQRICK MLYYLWMLHS VTLFLNLLAC LAWFSGNSSK GVDFGLSILW
160 170 180 190 200
FLIFTPCAFL CWYRPIYKAF RSDNSFSFFV FFFVFFCQIG IYIIQLVGIP
210 220 230 240 250
GLGDSGWIAA LSTLDNHSLA ISVIMMVVAG FFTLCAVLSV FLLQRVSGVG
260 270
RADSKWEEAG NRFLPLPRDV FHHCSWAS
Length:278
Mass (Da):31,261
Last modified:April 18, 2012 - v1
Checksum:i32CA1C7A5D14C86D
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091230 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000566480; ENSP00000455377; ENSG00000140497.
UCSCiuc059lml.1. human.

Similar proteinsi

Entry informationi

Entry nameiH3BPL9_HUMAN
AccessioniPrimary (citable) accession number: H3BPL9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 27, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported