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Protein
Submitted name:

BORCS8-MEF2B readthrough

Gene

BORCS8-MEF2B

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
BORCS8-MEF2B readthroughImported
Gene namesi
Name:BORCS8-MEF2BImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

EuPathDBiHostDB:ENSG00000064489.22.
HGNCiHGNC:39979. BORCS8-MEF2B.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000064489.

PTM / Processingi

Proteomic databases

MaxQBiH3BNR1.
PaxDbiH3BNR1.

Expressioni

Gene expression databases

BgeeiENSG00000064489.
ExpressionAtlasiH3BNR1. baseline and differential.

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliH3BNR1.
SMRiH3BNR1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 78MADS-boxInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
GeneTreeiENSGT00390000011828.
OMAiNTDILEX.
OrthoDBiEOG091G05BY.

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
Gene3Di3.40.1810.10. 1 hit.
InterProiView protein in InterPro
IPR033896. MADS_MEF2-like.
IPR002100. TF_MADSbox.
IPR036879. TF_MADSbox_sf.
PfamiView protein in Pfam
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

H3BNR1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVPRATDKD HSTQPGTMGR KKIQISRILD QRNRQVTFTK RKFGLMKKAY
60 70 80 90 100
ELSVLCDCEI ALIIFNSANR LFQYASTDMD RVLLKYTEYS EPHESRTNTD
110 120 130 140 150
ILETLKRRGI GLDGPELEPD EGPEEPGEKF RRLAGEGGDP ALPRPRLYPA
160 170 180 190 200
APAMPSPDVV YGALPPPGCD PSGLGEALPA QSRPSPFRPA APKAGPPGLV
210 220 230 240 250
HPLFSPSHLT SKTPPPLYLP TEGRRSDLPG GLAGPRGGLN TSRSLYSGLQ
260 270 280 290 300
NPCSTATPGP PLGSFPFLPG GPPVGAEAWA RRVPQPAAPP RRPPQSASSL
310 320 330 340 350
SASLRPPGAP ATFLRPSPIP CSSPGPWQSL CGLGPPCAGC PWPTAGPGRR
360 370 380
SPGGTSPERS PGTARARGDP TSLQASSEKT QQ
Length:382
Mass (Da):40,459
Last modified:November 13, 2013 - v3
Checksum:i86F37603BC4BD393
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002126 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000514819; ENSP00000454967; ENSG00000064489.
UCSCiuc060vxs.1. human.

Similar proteinsi

Entry informationi

Entry nameiH3BNR1_HUMAN
AccessioniPrimary (citable) accession number: H3BNR1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: November 13, 2013
Last modified: October 25, 2017
This is version 48 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported