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Protein
Submitted name:

Hepatocyte nuclear factor 1-alpha

Gene

Hnf1a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Hepatocyte nuclear factor 1-alphaImported
Gene namesi
Name:Hnf1aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:98504. Hnf1a.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiH3BL72.
PaxDbiH3BL72.
PeptideAtlasiH3BL72.

Expressioni

Gene expression databases

BgeeiENSMUSG00000029556.
ExpressionAtlasiH3BL72. baseline and differential.

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliH3BL72.
SMRiH3BL72.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 168HNF-1_NInterPro annotationAdd BLAST161

Phylogenomic databases

eggNOGiENOG410IFA0. Eukaryota.
ENOG410ZZZ0. LUCA.
GeneTreeiENSGT00900000141012.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR006899. HNF-1_N.
IPR023219. HNF1_dimer_N_dom_sf.
IPR009057. Homeobox-like_sf.
IPR001356. Homeobox_dom.
IPR010982. Lambda_DNA-bd_dom_sf.
PfamiView protein in Pfam
PF04814. HNF-1_N. 1 hit.
SUPFAMiSSF100957. SSF100957. 1 hit.
SSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.

Sequencei

Sequence statusi: Complete.

H3BL72-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSKLSQLQT ELLAALLESG LSKEALIQAL GEPGPYLMVG EGPLDKGESC
60 70 80 90 100
GGSRGDLTEL PNGLGETRGS EDDTDDDGED FAPPILKELE NLSPEEAAHQ
110 120 130 140 150
KAVVESLLQE DPWRVAKMVK SYLQQHNIPQ REVVDTTGLN QSHLSQHLNK
160 170 180 190 200
GTPMKTQKRA ALYTWYVRKQ REVAQQFTHA GQGGLIEEPT GDELPTKKGR
210 220 230 240
RNRFKWGPAS QQILFQAYER QKNPSKEERE TLVEECNRCT VRTVCNQ
Length:247
Mass (Da):27,566
Last modified:April 18, 2012 - v1
Checksum:i0AE84779F0F6929A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC116500 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000176550; ENSMUSP00000135678; ENSMUSG00000029556.

Similar proteinsi

Entry informationi

Entry nameiH3BL72_MOUSE
AccessioniPrimary (citable) accession number: H3BL72
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: November 22, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported