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Protein
Submitted name:

Low-density lipoprotein receptor-related protein 5

Gene

Lrp5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Low-density lipoprotein receptor-related protein 5Imported
Gene namesi
Name:Lrp5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 19

Organism-specific databases

MGIiMGI:1278315. Lrp5.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei16 – 37HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

MaxQBiH3BJH0.
PaxDbiH3BJH0.
PeptideAtlasiH3BJH0.
PRIDEiH3BJH0.

Expressioni

Gene expression databases

BgeeiENSMUSG00000024913.
ExpressionAtlasiH3BJH0. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025856.

Structurei

3D structure databases

ProteinModelPortaliH3BJH0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410KD0T. Eukaryota.
ENOG4111JJ7. LUCA.
GeneTreeiENSGT00760000118968.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR000033. LDLR_classB_rpt.
[Graphical view]
PfamiPF00058. Ldl_recept_b. 2 hits.
[Graphical view]
SMARTiSM00135. LY. 4 hits.
[Graphical view]
PROSITEiPS51120. LDLRB. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H3BJH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METAPTRAPP PPPPPLLLLV LYCSLVPAAA SPLLLFANRR DVRLVDAGGV
60 70 80 90 100
KLESTIVASG LEDAAAVDFQ FSKGAVYWTD VSEEAIKQTY LNQTGAAAQN
110 120 130 140 150
IVISGLVSPD GLACDWVGKK LYWTDSETNR IEVANLNGTS RKVLFWQDLD
160 170 180 190 200
QPRAIALDPA HGYMYWTDWG EAPRIERAGM DGSTRKIIVD SDIYWPNGLT
210 220 230 240 250
IDLEEQKLYW ADAKLSFIHR ANLDGSFRNM LNVPSKLCER NIHSLRDGSC
260 270
ARRALSSIPA GHTIRGRRWW RAASLTLLP
Length:279
Mass (Da):30,888
Last modified:April 18, 2012 - v1
Checksum:i6D1A15C7FAE1DE65
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000177330; ENSMUSP00000134983; ENSMUSG00000024913.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliH3BJH0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025856.

Proteomic databases

MaxQBiH3BJH0.
PaxDbiH3BJH0.
PeptideAtlasiH3BJH0.
PRIDEiH3BJH0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000177330; ENSMUSP00000134983; ENSMUSG00000024913.

Organism-specific databases

MGIiMGI:1278315. Lrp5.

Phylogenomic databases

eggNOGiENOG410KD0T. Eukaryota.
ENOG4111JJ7. LUCA.
GeneTreeiENSGT00760000118968.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000024913.
ExpressionAtlasiH3BJH0. baseline and differential.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR000033. LDLR_classB_rpt.
[Graphical view]
PfamiPF00058. Ldl_recept_b. 2 hits.
[Graphical view]
SMARTiSM00135. LY. 4 hits.
[Graphical view]
PROSITEiPS51120. LDLRB. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiH3BJH0_MOUSE
AccessioniPrimary (citable) accession number: H3BJH0
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: November 30, 2016
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.