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Protein
Submitted name:

Low-density lipoprotein receptor-related protein 5

Gene

Lrp5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. coreceptor activity Source: GO_Central
  2. Wnt-activated receptor activity Source: MGI
  3. Wnt-protein binding Source: MGI

GO - Biological processi

  1. adipose tissue development Source: MGI
  2. anatomical structure regression Source: MGI
  3. anterior/posterior pattern specification Source: MGI
  4. apoptotic process involved in patterning of blood vessels Source: MGI
  5. bone marrow development Source: MGI
  6. bone morphogenesis Source: MGI
  7. bone remodeling Source: MGI
  8. branching involved in mammary gland duct morphogenesis Source: MGI
  9. canonical Wnt signaling pathway Source: MGI
  10. cell-cell signaling involved in mammary gland development Source: MGI
  11. cell migration involved in gastrulation Source: MGI
  12. cholesterol homeostasis Source: MGI
  13. cholesterol metabolic process Source: MGI
  14. embryonic camera-type eye morphogenesis Source: GO_Central
  15. embryonic digit morphogenesis Source: MGI
  16. embryonic retina morphogenesis in camera-type eye Source: GO_Central
  17. gastrulation with mouth forming second Source: MGI
  18. glucose catabolic process Source: MGI
  19. limb morphogenesis Source: MGI
  20. mammary gland duct morphogenesis Source: MGI
  21. negative regulation of osteoblast differentiation Source: MGI
  22. negative regulation of protein serine/threonine kinase activity Source: MGI
  23. osteoblast development Source: MGI
  24. positive regulation of cell proliferation Source: MGI
  25. positive regulation of fat cell differentiation Source: MGI
  26. positive regulation of mesenchymal cell proliferation Source: MGI
  27. positive regulation of mitotic nuclear division Source: MGI
  28. positive regulation of osteoblast proliferation Source: MGI
  29. positive regulation of transcription, DNA-templated Source: MGI
  30. positive regulation of transcription from RNA polymerase II promoter Source: MGI
  31. regulation of apoptotic process Source: MGI
  32. regulation of blood pressure Source: MGI
  33. regulation of bone remodeling Source: MGI
  34. regulation of canonical Wnt signaling pathway Source: MGI
  35. regulation of fat cell differentiation Source: GO_Central
  36. regulation of insulin secretion involved in cellular response to glucose stimulus Source: MGI
  37. regulation of ossification Source: GO_Central
  38. retinal blood vessel morphogenesis Source: MGI
  39. retina morphogenesis in camera-type eye Source: MGI
  40. retina vasculature morphogenesis in camera-type eye Source: MGI
  41. somatic stem cell maintenance Source: MGI
  42. vasculature development Source: MGI
  43. Wnt signaling pathway Source: MGI
  44. Wnt signaling pathway involved in dorsal/ventral axis specification Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Low-density lipoprotein receptor-related protein 5Imported
Gene namesi
Name:Lrp5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 19

Organism-specific databases

MGIiMGI:1278315. Lrp5.

Subcellular locationi

GO - Cellular componenti

  1. mitochondrion Source: MGI
  2. plasma membrane Source: MGI
  3. receptor complex Source: MGI
Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

BgeeiH3BIY3.
ExpressionAtlasiH3BIY3. baseline and differential.

Family & Domainsi

Keywords - Domaini

EGF-like domainSAAS annotation, RepeatSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118968.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR000742. EG-like_dom.
IPR000033. LDLR_classB_rpt.
[Graphical view]
PfamiPF00058. Ldl_recept_b. 4 hits.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00135. LY. 4 hits.
[Graphical view]
PROSITEiPS51120. LDLRB. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

H3BIY3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
WMGKNLYWAD TGTNRIEVAR LDGQFRQVLV WRDLDNPRSL ALDPTKGYIY
60 70 80 90 100
WTEWGGKPRI VRAFMDGTNC MTLVDKVGRA NDLTIDYADQ RLYWTDLDTN
110 120 130 140 150
MIESSNMLGQ ERMVIADDLP YPFGLTQYSD YIYWTDWNLH SIERADKTSG
160 170 180 190 200
RNRTLIQGHL DFVMDILVFH SSRQDGLNDC VHSNGQCGQL CLAIPGGHRC
210 220
GCASHYTLDP SSRNCSQICH QPDDPR
Length:226
Mass (Da):25,946
Last modified:April 17, 2012 - v1
Checksum:iF01E5512E5E03F84
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000177294; ENSMUSP00000134771; ENSMUSG00000024913.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000177294; ENSMUSP00000134771; ENSMUSG00000024913.

Organism-specific databases

MGIiMGI:1278315. Lrp5.

Phylogenomic databases

GeneTreeiENSGT00760000118968.

Miscellaneous databases

NextBioi35561366.
SOURCEiSearch...

Gene expression databases

BgeeiH3BIY3.
ExpressionAtlasiH3BIY3. baseline and differential.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR000742. EG-like_dom.
IPR000033. LDLR_classB_rpt.
[Graphical view]
PfamiPF00058. Ldl_recept_b. 4 hits.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00135. LY. 4 hits.
[Graphical view]
PROSITEiPS51120. LDLRB. 4 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (JAN-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiH3BIY3_MOUSE
AccessioniPrimary (citable) accession number: H3BIY3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 17, 2012
Last sequence update: April 17, 2012
Last modified: March 31, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.