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H3BIY3

- H3BIY3_MOUSE

UniProt

H3BIY3 - H3BIY3_MOUSE

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Protein
Submitted name:

Low-density lipoprotein receptor-related protein 5

Gene

Lrp5

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. coreceptor activity Source: RefGenome
  2. Wnt-activated receptor activity Source: MGI
  3. Wnt-protein binding Source: MGI

GO - Biological processi

  1. adipose tissue development Source: RefGenome
  2. anatomical structure regression Source: MGI
  3. anterior/posterior pattern specification Source: MGI
  4. apoptotic process involved in patterning of blood vessels Source: MGI
  5. bone marrow development Source: RefGenome
  6. bone morphogenesis Source: RefGenome
  7. bone remodeling Source: MGI
  8. branching involved in mammary gland duct morphogenesis Source: MGI
  9. canonical Wnt signaling pathway Source: MGI
  10. cell-cell signaling involved in mammary gland development Source: MGI
  11. cell migration involved in gastrulation Source: MGI
  12. cholesterol homeostasis Source: RefGenome
  13. cholesterol metabolic process Source: MGI
  14. embryonic camera-type eye morphogenesis Source: RefGenome
  15. embryonic digit morphogenesis Source: MGI
  16. embryonic retina morphogenesis in camera-type eye Source: RefGenome
  17. gastrulation with mouth forming second Source: MGI
  18. limb morphogenesis Source: MGI
  19. mammary gland duct morphogenesis Source: MGI
  20. osteoblast development Source: MGI
  21. positive regulation of osteoblast proliferation Source: MGI
  22. positive regulation of transcription from RNA polymerase II promoter Source: RefGenome
  23. regulation of apoptotic process Source: MGI
  24. regulation of bone remodeling Source: MGI
  25. regulation of fat cell differentiation Source: RefGenome
  26. regulation of insulin secretion involved in cellular response to glucose stimulus Source: MGI
  27. regulation of ossification Source: RefGenome
  28. retinal blood vessel morphogenesis Source: RefGenome
  29. retina vasculature morphogenesis in camera-type eye Source: MGI
  30. somatic stem cell maintenance Source: MGI
  31. vasculature development Source: MGI
  32. Wnt signaling pathway Source: MGI
  33. Wnt signaling pathway involved in dorsal/ventral axis specification Source: RefGenome
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Low-density lipoprotein receptor-related protein 5Imported
Gene namesi
Name:Lrp5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 19

Organism-specific databases

MGIiMGI:1278315. Lrp5.

Subcellular locationi

GO - Cellular componenti

  1. mitochondrion Source: MGI
  2. plasma membrane Source: RefGenome
  3. receptor complex Source: RefGenome
Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

BgeeiH3BIY3.
ExpressionAtlasiH3BIY3. baseline and differential.

Family & Domainsi

Keywords - Domaini

EGF-like domainSAAS annotation, RepeatSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118968.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR000742. EG-like_dom.
IPR000033. LDLR_classB_rpt.
[Graphical view]
PfamiPF00058. Ldl_recept_b. 4 hits.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00135. LY. 4 hits.
[Graphical view]
PROSITEiPS51120. LDLRB. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

H3BIY3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
WMGKNLYWAD TGTNRIEVAR LDGQFRQVLV WRDLDNPRSL ALDPTKGYIY
60 70 80 90 100
WTEWGGKPRI VRAFMDGTNC MTLVDKVGRA NDLTIDYADQ RLYWTDLDTN
110 120 130 140 150
MIESSNMLGQ ERMVIADDLP YPFGLTQYSD YIYWTDWNLH SIERADKTSG
160 170 180 190 200
RNRTLIQGHL DFVMDILVFH SSRQDGLNDC VHSNGQCGQL CLAIPGGHRC
210 220
GCASHYTLDP SSRNCSQICH QPDDPR
Length:226
Mass (Da):25,946
Last modified:April 18, 2012 - v1
Checksum:iF01E5512E5E03F84
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000177294; ENSMUSP00000134771; ENSMUSG00000024913.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000177294 ; ENSMUSP00000134771 ; ENSMUSG00000024913 .

Organism-specific databases

MGIi MGI:1278315. Lrp5.

Phylogenomic databases

GeneTreei ENSGT00760000118968.

Miscellaneous databases

NextBioi 35561366.
SOURCEi Search...

Gene expression databases

Bgeei H3BIY3.
ExpressionAtlasi H3BIY3. baseline and differential.

Family and domain databases

Gene3Di 2.120.10.30. 1 hit.
InterProi IPR011042. 6-blade_b-propeller_TolB-like.
IPR000742. EG-like_dom.
IPR000033. LDLR_classB_rpt.
[Graphical view ]
Pfami PF00058. Ldl_recept_b. 4 hits.
[Graphical view ]
SMARTi SM00181. EGF. 1 hit.
SM00135. LY. 4 hits.
[Graphical view ]
PROSITEi PS51120. LDLRB. 4 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiH3BIY3_MOUSE
AccessioniPrimary (citable) accession number: H3BIY3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: October 29, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3