Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Low-density lipoprotein receptor-related protein 5

Gene

Lrp5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Low-density lipoprotein receptor-related protein 5Imported
Gene namesi
Name:Lrp5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 19

Organism-specific databases

MGIiMGI:1278315. Lrp5.

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiH3BIY3.

Expressioni

Gene expression databases

BgeeiH3BIY3.
ExpressionAtlasiH3BIY3. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025856.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini179 – 21638EGF-likeInterPro annotationAdd
BLAST

Keywords - Domaini

EGF-like domainSAAS annotation, RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG410KD0T. Eukaryota.
ENOG4111JJ7. LUCA.
GeneTreeiENSGT00760000118968.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR000742. EGF-like_dom.
IPR000033. LDLR_classB_rpt.
[Graphical view]
PfamiPF00058. Ldl_recept_b. 4 hits.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00135. LY. 4 hits.
[Graphical view]
PROSITEiPS51120. LDLRB. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

H3BIY3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
WMGKNLYWAD TGTNRIEVAR LDGQFRQVLV WRDLDNPRSL ALDPTKGYIY
60 70 80 90 100
WTEWGGKPRI VRAFMDGTNC MTLVDKVGRA NDLTIDYADQ RLYWTDLDTN
110 120 130 140 150
MIESSNMLGQ ERMVIADDLP YPFGLTQYSD YIYWTDWNLH SIERADKTSG
160 170 180 190 200
RNRTLIQGHL DFVMDILVFH SSRQDGLNDC VHSNGQCGQL CLAIPGGHRC
210 220
GCASHYTLDP SSRNCSQICH QPDDPR
Length:226
Mass (Da):25,946
Last modified:April 18, 2012 - v1
Checksum:iF01E5512E5E03F84
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000177294; ENSMUSP00000134771; ENSMUSG00000024913.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112990 Genomic DNA. No translation available.
AC117797 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000025856.

Proteomic databases

PaxDbiH3BIY3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000177294; ENSMUSP00000134771; ENSMUSG00000024913.

Organism-specific databases

MGIiMGI:1278315. Lrp5.

Phylogenomic databases

eggNOGiENOG410KD0T. Eukaryota.
ENOG4111JJ7. LUCA.
GeneTreeiENSGT00760000118968.

Miscellaneous databases

NextBioi35561366.
SOURCEiSearch...

Gene expression databases

BgeeiH3BIY3.
ExpressionAtlasiH3BIY3. baseline and differential.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR000742. EGF-like_dom.
IPR000033. LDLR_classB_rpt.
[Graphical view]
PfamiPF00058. Ldl_recept_b. 4 hits.
[Graphical view]
SMARTiSM00181. EGF. 1 hit.
SM00135. LY. 4 hits.
[Graphical view]
PROSITEiPS51120. LDLRB. 4 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiH3BIY3_MOUSE
AccessioniPrimary (citable) accession number: H3BIY3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: April 13, 2016
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.