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Protein
Submitted name:

Uncharacterized protein

Gene

ZFPM1

Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ZFPM1Imported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000020932.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini102 – 135CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini154 – 183C2H2-typeInterPro annotationAdd BLAST30
Domaini184 – 211C2H2-typeInterPro annotationAdd BLAST28
Domaini271 – 298C2H2-typeInterPro annotationAdd BLAST28
Domaini473 – 506CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini602 – 635CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini737 – 770CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini979 – 1012CCHC FOG-typeInterPro annotationAdd BLAST34

Sequence similaritiesi

Belongs to the FOG (Friend of GATA) family.PROSITE-ProRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiH3BGB1.
OMAiPTHPIII.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
IPR013083. Znf_RING/FYVE/PHD.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 10 hits.
SUPFAMiSSF57667. SSF57667. 6 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 5 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.

Sequencei

Sequence statusi: Complete.

H3BGB1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TLQTEDEKCW LTRLTFVSNE AEANLVIYCK DGEIWCKTRG VVSEGECLCA
60 70 80 90 100
SITASCEVGP PAVPNHVMKV ESAEPSSPPT LHSEIQLLPQ QAGMAAILAT
110 120 130 140 150
AVVNKDIFPC KDCGIWFRSE RNLQAHLMYY CASRQKSGSP AAEEKPKEVC
160 170 180 190 200
PNERFCPFPQ CNKSCPSASS LEIHMRSHSG ERPFVCLICY SAFTTKANCE
210 220 230 240 250
RHLKVHTDTL KGVCHGCGFT STTRDILYSH LVIDHMICQP GSKGEVYSPG
260 270 280 290 300
SRLPAVPLAS GFTPVSPTTS LKCALCGFTA NTLVSLHQHT LVHTSKSPAT
310 320 330 340 350
GDQIHTQFQC GTEPSESSEI VRSPQQEAVD TKENGEAAAP SESSSLAHTI
360 370 380 390 400
ITVKIKEEPQ QNHNSESENE DGEKNPDQQG QLNPANDPSS RTSSPRSLSS
410 420 430 440 450
IKVKTEISSP TPGSSPVHYG SSSVGPGGAV FLPQYMFNHE PPQASEILAK
460 470 480 490 500
MSELVHTRLK QGHNSVSSLY AGAPVQKGAT CFECEITFNN INNYFVHKRL
510 520 530 540 550
YCSGRHQQDD NPTSSRRAKA GPQAGTVAST NLQSSSSTTE SQTVSGLHSD
560 570 580 590 600
TEPNSSTNSI DTKVTEVKVE DNTTKDTSSE GENASRVSEG SQSPSNSVDE
610 620 630 640 650
QDEDPTKTAC EACNIRFIRH ENYIVHKRYY CASRHDPPLD RPNACKAPFL
660 670 680 690 700
PQPVRTRKRR KLYEIHGTAA IAQFGSAVSP VEPLNIKQEP SSVSRSDGTT
710 720 730 740 750
ALTSFIPTTN SSPDGEGPID LSKKPRLHEG PLSPSVLPLT DYHECTACRI
760 770 780 790 800
SFNNVENYLA HKKYYCPATS LQQKTIEQLQ KIKSPVPGLA KRTASATSES
810 820 830 840 850
TKTSEPLEGR RVEKNIPVSP NSISPCTNAV SPTVTAAICP YCPLNGPITG
860 870 880 890 900
DMIEHFRNVH GLFITKQTST QTRPVGPSIS ESSLQTPRLP SKSPPQAGSR
910 920 930 940 950
AQKDSFICKE QKEPTLVTSR NGSPIQTISP RPVLPVSPVV PLNISPVPDS
960 970 980 990 1000
LREAGLKPLS SPVFIDKSVQ TPKGLSAPVQ NGNSRYCRLC NIKFNSLSTF
1010
IAHKKYYCSS HAAEHVK
Length:1,017
Mass (Da):110,328
Last modified:April 18, 2012 - v1
Checksum:i9627860CE7317F65
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01017478 Genomic DNA. No translation available.
AFYH01017479 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSLACT00000021072; ENSLACP00000020932; ENSLACG00000018391.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01017478 Genomic DNA. No translation available.
AFYH01017479 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7897.ENSLACP00000020932.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSLACT00000021072; ENSLACP00000020932; ENSLACG00000018391.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
InParanoidiH3BGB1.
OMAiPTHPIII.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
IPR013083. Znf_RING/FYVE/PHD.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 10 hits.
SUPFAMiSSF57667. SSF57667. 6 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 5 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiH3BGB1_LATCH
AccessioniPrimary (citable) accession number: H3BGB1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: June 7, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.