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Protein
Submitted name:

Uncharacterized protein

Gene

GNB2L1

Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:GNB2L1Imported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Subcellular locationi

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000017186.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 317WD_REPEATS_REGIONInterPro annotationAdd BLAST307
Repeati11 – 53WDPROSITE-ProRule annotationAdd BLAST43
Repeati59 – 100WDPROSITE-ProRule annotationAdd BLAST42
Repeati101 – 133WDPROSITE-ProRule annotationAdd BLAST33
Repeati144 – 187WDPROSITE-ProRule annotationAdd BLAST44
Repeati188 – 229WDPROSITE-ProRule annotationAdd BLAST42
Repeati287 – 317WDPROSITE-ProRule annotationAdd BLAST31

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0279. Eukaryota.
ENOG410XQGZ. LUCA.
GeneTreeiENSGT00890000139419.
InParanoidiH3B5L5.
OMAiQYGYPKR.
OrthoDBiEOG091G0KZQ.
TreeFamiTF300600.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiView protein in InterPro
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom_sf.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
IPR036322. WD40_repeat_dom_sf.
PfamiView protein in Pfam
PF00400. WD40. 7 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00320. WD40. 7 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

H3B5L5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEQMTLRGT LKGHNGWVTQ IATTPQFPDM ILSASRDKSI IMWKLTRDET
60 70 80 90 100
NYGIPQRALR GHAHFVSDVV ISSDGQFALS GSWDSNLRLW DLTLGITTRQ
110 120 130 140 150
FVGHSKDVLS VAFSADNRQI VSGSRDKTIK LWNTLGVCKY TIQDEGHTEW
160 170 180 190 200
ASCVRFSPNS NNPIIVSCGW DRLVKVWNLA NCKLKTNHIG HVGYLNTVTV
210 220 230 240 250
SPDGSLCASG GKDGQAMLWD LNEGKHLYTL DGGDIINALC FSPNRYWLCA
260 270 280 290 300
ATGPSIKIWD LEGKIIVDEL RQEVISTSSK AEPPQCTSLA WSADGQTLFA
310
GYTDNLIRVW QVTIGTR
Length:317
Mass (Da):35,121
Last modified:April 18, 2012 - v1
Checksum:i61E90DC24AD6D8B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01018743 Genomic DNA. No translation available.
AFYH01018744 Genomic DNA. No translation available.
RefSeqiXP_005989393.1. XM_005989331.2.

Genome annotation databases

EnsembliENSLACT00000017312; ENSLACP00000017186; ENSLACG00000015141.
GeneIDi102346429.

Similar proteinsi

Entry informationi

Entry nameiH3B5L5_LATCH
AccessioniPrimary (citable) accession number: H3B5L5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: January 31, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported