Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transformer 2 alpha homolog

Gene

TRA2A

Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transformer 2 alpha homologImported
Gene namesi
Name:TRA2AImported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000016758.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini135 – 213RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiENOG410IQWZ. Eukaryota.
ENOG4111HSX. LUCA.
GeneTreeiENSGT00710000106295.
InParanoidiH3B4D7.
KOiK12897.
OMAiDRYEEYD.
OrthoDBiEOG091G0Y02.
TreeFamiTF106265.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiView protein in InterPro
IPR012677. Nucleotide-bd_a/b_plait_sf.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Complete.

H3B4D7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDVEENTFE GRESRSQSKS PAGSTARVKS ESRSGSRSPS RNSKRSESRS
60 70 80 90 100
RSRSKSRSRS RRHSHRRYTR SRSRSRSHRR RSRSRSYTPE YRRRRSRSHS
110 120 130 140 150
PMSNRRRHTG SREVPWKKSR DQRGRGDQAN PDPNTCLGVF GLSLYTTERD
160 170 180 190 200
LREVFSRYGP LAGVNVVYDQ RTGRSRGFAF VYFERIDDSK EAMERANGME
210 220 230 240 250
LDGRRIRVDY SITKRAHTPT PGIYMGRPTH GGGGGGGGGR RRESYYDRGY
260 270 280
DRYDRYDEYD YRYRRRSPSP YYSRYRSRSR SRSYSPRRY
Length:289
Mass (Da):34,105
Last modified:April 18, 2012 - v1
Checksum:i387BB48E370E2F13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01080516 Genomic DNA. No translation available.
AFYH01080517 Genomic DNA. No translation available.
AFYH01080518 Genomic DNA. No translation available.
AFYH01080519 Genomic DNA. No translation available.
AFYH01080520 Genomic DNA. No translation available.
RefSeqiXP_005997166.1. XM_005997104.2.

Genome annotation databases

EnsembliENSLACT00000016876; ENSLACP00000016758; ENSLACG00000014765.
GeneIDi102345845.
KEGGilcm:102345845.

Similar proteinsi

Entry informationi

Entry nameiH3B4D7_LATCH
AccessioniPrimary (citable) accession number: H3B4D7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: March 28, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported