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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000009226.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini453 – 618Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1763 – 1916Helicase C-terminalInterPro annotationAdd BLAST154

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili223 – 250Sequence analysisAdd BLAST28
Coiled coili2002 – 2029Sequence analysisAdd BLAST28
Coiled coili2046 – 2073Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0391. Eukaryota.
COG0553. LUCA.
GeneTreeiENSGT00530000063427.
InParanoidiH3AHV5.
OMAiENDGFPA.
OrthoDBiEOG091G045T.
TreeFamiTF106424.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
PRINTSiPR00929. ATHOOK.
SMARTiView protein in SMART
SM00384. AT_hook. 3 hits.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 4 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.

Sequencei

Sequence statusi: Complete.

H3AHV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVIRHHEEQR QKEERAKREE QAKLRRIASS IAKEVKQFWT NVEKVVQFKQ
60 70 80 90 100
QSRLDEKRKK ALDLQLDFIV GQTEKYSDLL SQSLNEAPPT SKPGSSHIGS
110 120 130 140 150
SYTGSVSSSP RRPESLNQDE GPDEDFEPHE EEDDEETIEV EEQQEGNDSE
160 170 180 190 200
THKQEIELLK RESQVPLEEL LQSLPPQILE NSGSPQTSDM EEEEEEEEDD
210 220 230 240 250
EDEDDDEDEE EESDKETEEM TKTHKEEEED DEFTANVEEA QDEEETIEAQ
260 270 280 290 300
EVLEGDVDHA AELDDLVKEG ELSMEQLLQK YAGAYAEDFQ FPESPKDSEK
310 320 330 340 350
SEGEEEGEEE DDDDTTSEDD DDESSSGVEA LCSAESIMKL SPFLVLTSVS
360 370 380 390 400
LVCFLCFGSD SLSEQLSEEE EKVEDVGMEY LLKHREVEDE KSNDSAQTED
410 420 430 440 450
RGPKKEITDI AAAAESLQPK GYTLATTQVK TPIPFLLRGT LREYQHIGLD
460 470 480 490 500
WLVTMYEKKL NGILADEMGL GKTIQTISLL AHLACEKGNW GPHLIIVPTS
510 520 530 540 550
VMLNWEMEFK RWCPGFKILT YYGSQKERKL KRQGWTKPNA FHVCITSYKL
560 570 580 590 600
VLQDHQAFRR KNWRYLILDE AQNIKNFKSQ RWQSLLNFNS QRRLLLTGTP
610 620 630 640 650
LQNSLMELWS LMHFLMPHVF QSHREFKEWF SNPLTGMIEG SQEYNESLIK
660 670 680 690 700
RLHKVLRPFL LRRVKVDVEK QMPKKYEHVI RCRLSKRQRY LYDDFMAQAS
710 720 730 740 750
TKETLASGHF MSVINILMQL RKVCNHPNLF DPRPIHSPFI TQGICFTTAS
760 770 780 790 800
LVLTALHADP FKHADLSIFD LVNIENKVSR YEAEMFLPKR KVSRKLIEEI
810 820 830 840 850
ADSPDPPPRP RPVKMKVNRM LQPVPKPDGR TVVLVNSPRA PVPTQRPLVG
860 870 880 890 900
GLSEVPAMIP PAAPLTQQPA AAVPAPTATA QALGTVNPVV SYSSPVVPLA
910 920 930 940 950
VPAPHPPVVV QQNAAPQHPA LNQAAAASLL TAPTSIPQAS PVTATAMRPS
960 970 980 990 1000
TALPTPTVRF STTTLTHSNS NQQLPGYTFT TPAGGVHQRL ILSPDIQAKL
1010 1020 1030 1040 1050
PSGEVVSIAQ LASLANRPVQ TSQGSKPVTF QIQGNKLTLT GTQIRHVSMG
1060 1070 1080 1090 1100
QPRPVQGNVV HLVSAGGQHH IISQPTQVAL IQTVSQQSCH PQVGVQTSSL
1110 1120 1130 1140 1150
QAVTGQQMGV SPGGITIPQS ATQGGLVLVG LGIHRSLLHS ARHIGKGSEV
1160 1170 1180 1190 1200
LGTSIGPSGI PASSSWDHWL EGASWTKGTS VVTTKWTWDL LESLSPLLFI
1210 1220 1230 1240 1250
LAVPSAVVNN SGGVVKIVVR QTPKDCVAST AAQLQRPCHL PTTTIQGVTT
1260 1270 1280 1290 1300
LAQRMPVPGT PAMSNALSAA PFRPLNQPSA SVGLQAHTAS SVRTLVHPPV
1310 1320 1330 1340 1350
PGPAQSTGLP PVSAPVQSAG PPSVTAPVPA AVPGAAQSAA PLPVLVPAPS
1360 1370 1380 1390 1400
AAPPPPVPVQ SAALPPLPVP APSAVPPSVP GHAQSTAPPL LPVPVPAPST
1410 1420 1430 1440 1450
APLLVSAHPP AAVRPPPVAI RPPVRLLQTS PAVVEMQGKY CPACNLSLCT
1460 1470 1480 1490 1500
SLEGSYHWPY CFWFLKLILP GGVAGPMPCF NMGGIALILL HRLASQPGGE
1510 1520 1530 1540 1550
GRCLAPPAGR MKHTRSTCWC KIQTNCIASC LIYLLSPAVQ PAASRLIDTI
1560 1570 1580 1590 1600
SVSSAAREDT EVLTLRSVTP TMMTTPPPPV STSTALLRLR RQPPPPPKSP
1610 1620 1630 1640 1650
FYLDSLEKRK RKQKEERLDR LFWLNERHCA ATPVYGTELI RICSVFDSAA
1660 1670 1680 1690 1700
PFRETAPEDE RWTEQYWQQT ETLCRAIRNP EERLEELADL IERFIFVMPP
1710 1720 1730 1740 1750
VEAPPITMHS SHPPPSYLRH LAFFRECMHR EVSQSAAPLH RVICNMRTQF
1760 1770 1780 1790 1800
PDLRLIQYDC VCKLQTLHIL LRQLKVGSHR VLVFTQMTRM LDVLEQFLNY
1810 1820 1830 1840 1850
HGHIYLRLDG TTRVEQRQAL MERFNADRRI FCFILSTRSG GVGVNLTGAD
1860 1870 1880 1890 1900
TVVFYDSDWN PTMDAQAQDR CHRIGQTRDV HIYRLISERT VEENILKKAN
1910 1920 1930 1940 1950
QKRMLGDMAI EGGNFTTAYF KQQTIRELFD FSVEEPVKKG EDVQPPPPQQ
1960 1970 1980 1990 2000
RADEEDSVSS KQTQILEQAL CKAEDEEDIR AASQAKAEQV AELAEFNENI
2010 2020 2030 2040 2050
PLDAEEGAGR EEEEEMSKAE QEIAALVEQL TPIERYAMNF LEASLEEISK
2060 2070 2080 2090 2100
EELKQAEEQV EAARKDLDLA KDEVFRLPGE DEDGAKASEE VIKKSKKGKG
2110 2120 2130 2140 2150
PPKTFSERQG TRMSERLRGT RPPITKGLPN EVVQKEEASS QYVTLSEQSK
2160 2170 2180 2190 2200
GDHEVPVLPA PSVSQTSEID ADVSTSLCPD KDLLGKLPAQ ELNKDFLVKV
2210 2220 2230 2240 2250
AEKQALKPVP AKGQQMHCTD IKQVDITQKA AQPPFNNVLK ESANISLAGK
2260 2270 2280 2290 2300
EKPAADGEEL KIDSPMKKKT LVASHSNQQE KLPATVDTKC DVLDQESKTS
2310 2320 2330 2340 2350
IVSVVLPHGS KMKKGEVEAD KQPQEVEEMA SDVHKGNMES VLVRVTESSE
2360 2370 2380 2390 2400
DKDLPCRPAI TKEATERSFV LSVCENETGE SKPPPAGFDR EASVHKEMTS
2410 2420 2430 2440 2450
SPQGGKAEES SPLTKVPRRR STADSEILRS QKNGDSPTAK VLRKLPGRII
2460 2470 2480 2490 2500
TIVEEREPTK RRRKLLKTQG EGEKSTAEVT APEHRFSNCV SEPESSGRDT
2510 2520 2530 2540 2550
PGLRNLPVRR RVEAESSESE SETAAKEKPK AECPQFVEKR KRGRPPKSPK
2560 2570 2580 2590 2600
LCQGAINLIK SSKSSSKGKD DHIDRKVKKK NPEEPETDPS SLRVQTEAKG
2610 2620 2630 2640 2650
PLGEPPVQKR KRGRPPKVCK IETPPETHNV VEPAQSKRSG IQTETPVSSP
2660 2670 2680 2690 2700
KSVSEESKSQ AKQSVDSGTS APFQKRKRGR PPKKDLSKRP EASPRVTRQR
2710 2720 2730 2740 2750
SSLVLERSNS QSLESDSATT SDEDAQRLTR SMRLKLEAQG LKNMSKRAES
2760 2770 2780 2790 2800
GSEASMRADD TSSVDSSASE LRSRRHWATK ETPSRSTRQR PGSLVPPLEN

EKQ
Length:2,803
Mass (Da):309,963
Last modified:April 18, 2012 - v1
Checksum:i765F0EF14B73516D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01115481 Genomic DNA. No translation available.
AFYH01115482 Genomic DNA. No translation available.
AFYH01115483 Genomic DNA. No translation available.
AFYH01115484 Genomic DNA. No translation available.
AFYH01115485 Genomic DNA. No translation available.
AFYH01115486 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSLACT00000009297; ENSLACP00000009226; ENSLACG00000008142.

Entry informationi

Entry nameiH3AHV5_LATCH
AccessioniPrimary (citable) accession number: H3AHV5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: October 25, 2017
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported