Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DEAD-box helicase 28

Gene

DDX28

Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
DEAD-box helicase 28Imported
Gene namesi
Name:DDX28Imported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000006288.

Structurei

3D structure databases

ProteinModelPortaliH3A9G7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini158 – 186Q_MOTIFInterPro annotationAdd BLAST29
Domaini189 – 379Helicase ATP-bindingInterPro annotationAdd BLAST191
Domaini408 – 561Helicase C-terminalInterPro annotationAdd BLAST154

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi158 – 186Q motifPROSITE-ProRule annotationAdd BLAST29

Phylogenomic databases

eggNOGiKOG0330. Eukaryota.
ENOG410XQU7. LUCA.
GeneTreeiENSGT00730000110914.
InParanoidiH3A9G7.
OMAiLHCIMPH.
OrthoDBiEOG091G06DC.
TreeFamiTF324977.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

H3A9G7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTAGGYRKA ALGARALLPT ACRRLAETQA GGPGIAPARL LVTSAPVCSS
60 70 80 90 100
HHHHQHPGGV PSESVIRVPR NLQRRADSLR QLQKSEPLRF RPSRPGRLLI
110 120 130 140 150
ACRRPAANQT LGYTCGKFEG PSLASKGWKH RKAFGDYFVI NPGHQGNHPA
160 170 180 190 200
VEEDKKASTF GSLGLCSPLI EALETLGIAR PTAVQLQTIP KLLRGQNVLC
210 220 230 240 250
AAETGSGKTF SYLLPAVHAL EAEDRAGGEA PGNPRCVVLV PSRELADQVQ
260 270 280 290 300
AVARSLSGFV NLNVRTIGGG RGVGSIKTAL SGDVADILVA TPGALWKALK
310 320 330 340 350
RDLVTLSNLR YFILDESDTL FDDSFIELVE DIFLHTRIAS NPSETSGLER
360 370 380 390 400
KAQLVVIGAT FPGGTGKLLS KVTDLGSILT VKSKRLHFLM PHVKQKFLKV
410 420 430 440 450
KGADKATELM QLLRTLSVEK PNTGMLIFCN SASTVNWLGY ILDDHGIKHL
460 470 480 490 500
RLQGQMPGAM RAGIFKTFQK GSVDVLICTD IASRGLDTGR VEMVVNFDFP
510 520 530 540 550
PSLTDYIHRA GRVGRVGSKT LGTVINYVTH PWDVELVQKI EAAARKRTIL
560 570
PGMESAIDKP LPQTEKIEFG SEV
Length:573
Mass (Da):61,886
Last modified:May 1, 2013 - v2
Checksum:iF5DF6DB32866D6E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01221058 Genomic DNA. No translation available.
RefSeqiXP_006010709.1. XM_006010647.2.

Genome annotation databases

EnsembliENSLACT00000006341; ENSLACP00000006288; ENSLACG00000005578.
GeneIDi102356803.

Similar proteinsi

Entry informationi

Entry nameiH3A9G7_LATCH
AccessioniPrimary (citable) accession number: H3A9G7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: May 1, 2013
Last modified: October 25, 2017
This is version 40 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported