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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Ciona savignyi (Pacific transparent sea squirt)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiCiona savignyi (Pacific transparent sea squirt)Imported
Taxonomic identifieri51511 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataTunicataAscidiaceaEnterogonaPhlebobranchiaCionidaeCiona
Proteomesi
  • UP000007875 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi51511.ENSCSAVP00000003798.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585. Eukaryota.
ENOG410XSTS. LUCA.
GeneTreeiENSGT00760000118897.
InParanoidiH2YEQ0.
OMAiFHAFVNE.
OrthoDBiEOG091G05OC.
TreeFamiTF106341.

Family and domain databases

CDDicd00182. TBOX. 1 hit.
Gene3Di2.60.40.820. 1 hit.
InterProiView protein in InterPro
IPR008967. p53-like_TF_DNA-bd.
IPR002070. TF_Brachyury.
IPR001699. TF_T-box.
IPR018186. TF_T-box_CS.
PANTHERiPTHR11267. PTHR11267. 1 hit.
PfamiView protein in Pfam
PF00907. T-box. 1 hit.
PRINTSiPR00938. BRACHYURY.
PR00937. TBOX.
SMARTiView protein in SMART
SM00425. TBOX. 1 hit.
SUPFAMiSSF49417. SSF49417. 1 hit.
PROSITEiView protein in PROSITE
PS01283. TBOX_1. 1 hit.
PS01264. TBOX_2. 1 hit.
PS50252. TBOX_3. 1 hit.

Sequencei

Sequence statusi: Complete.

H2YEQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATTGKSMTS TLESCLMTGQ NTNESSCVKM SLVDQNLWSR FHAFVNEMIV
60 70 80 90 100
TKNGRRMFPV LKTTISGLDP TAMYSVMLDF VAVDNNRWKY VNGEWVPGGK
110 120 130 140 150
PEPHVTSCAY IHPDSPNFGS HWMKQPVGFS RVKLTNKATG NAQQIMLNSL
160 170 180 190 200
HKYEPRIHIM KVGGAESQQI VATHSFTETR FIAVTAYQNE DVTSLKIKYN
210 220 230 240 250
PFAKAFLDAK ESRTETETYY KDTANAGTSQ TYARVSSWTP GINQANGDNL
260 270 280 290 300
PSVYHCDPAT RNDFGVNPMF APTNCPSPYQ PYARERSSSR SQRSQYNYHP
310 320 330 340 350
YSHREAHHSM PYHQDLSTPI DVNATPSHET LCYPTGYQVM TADQWPHTAI
360 370 380 390 400
PHHDVAEQGT FSLDQVSVED MASLAFESAT SSASLTQSDF STVDSFDSSN
410 420 430 440 450
FGAHWSYSTN HIQGYNSNSP ISEFEPNAHS AHYIPNPYEM SPQDCLNVAA
460 470 480 490
TEENTITASL YHSPSPPSAE LGQSSPLADA YDPTKLTSNW TPLTPPSL
Length:498
Mass (Da):55,313
Last modified:April 18, 2012 - v1
Checksum:iD98E95928093943A
GO

Genome annotation databases

EnsembliENSCSAVT00000003855; ENSCSAVP00000003798; ENSCSAVG00000002247.

Similar proteinsi

Entry informationi

Entry nameiH2YEQ0_CIOSA
AccessioniPrimary (citable) accession number: H2YEQ0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: May 10, 2017
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported