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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Ciona savignyi (Pacific transparent sea squirt)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi111 – 118ATPPROSITE-ProRule annotation8
Nucleotide bindingi381 – 388ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

LigandATP-bindingPROSITE-ProRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiCiona savignyi (Pacific transparent sea squirt)Imported
Taxonomic identifieri51511 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataTunicataAscidiaceaEnterogonaPhlebobranchiaCionidaeCiona
Proteomesi
  • UP000007875 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi51511.ENSCSAVP00000003664.

Structurei

3D structure databases

ProteinModelPortaliH2YEB6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 384Fe-4S ferredoxin-typeInterPro annotationAdd BLAST31
Domaini47 – 764Fe-4S ferredoxin-typeInterPro annotationAdd BLAST30
Domaini80 – 316ABC transporterInterPro annotationAdd BLAST237
Domaini342 – 564ABC transporterInterPro annotationAdd BLAST223

Phylogenomic databases

eggNOGiKOG0063. Eukaryota.
COG1245. LUCA.
GeneTreeiENSGT00390000015089.
InParanoidiH2YEB6.
OMAiETTHRYS.
OrthoDBiEOG091G038V.
TreeFamiTF105206.

Family and domain databases

CDDicd03236. ABC_RNaseL_inhibitor_domain1. 1 hit.
InterProiView protein in InterPro
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
IPR013283. RLI1.
IPR034348. RLI_dom_1.
IPR007209. RNaseL-inhib_metal-bd_dom.
PANTHERiPTHR19248. PTHR19248. 1 hit.
PfamiView protein in Pfam
PF00005. ABC_tran. 2 hits.
PF00037. Fer4. 1 hit.
PF04068. RLI. 1 hit.
PRINTSiPR01868. ABCEFAMILY.
SMARTiView protein in SMART
SM00382. AAA. 2 hits.
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.

Sequencei

Sequence statusi: Complete.

H2YEB6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNNQNTRIA IVNNDKCKPK RCRQECRKSC PVVRMGKLCI EVTPLSKLAW
60 70 80 90 100
ISEELCIGCG ICVKKCPFEA ITIINLPSNL EKDTTHRYSA NSFKLHRLPI
110 120 130 140 150
PRAGEVLGLV GTNGIGKSTA LKILAGKQKP NLGCYDEPPD WTEILSYFRG
160 170 180 190 200
SELQNYFTKI LEDDMKAVIK PQYVDQIPKA VKGSVQAMLD RKDDSGTQEH
210 220 230 240 250
FCDLLDLTRV LTRNIGDLSG GELQRFAIAV VCVQKADVYM FDEPSSYLDV
260 270 280 290 300
KQRLNAAVAI RNLLGTTNYV IVVEHDLSVL DYLSDFICCL YGVPGAYGVV
310 320 330 340 350
TMPSTVREGI NIFLDGFVPS ENLRFRDTSL VFKVSETADS EEEIKKMCRY
360 370 380 390 400
GYGDMMKKLG DFELTVKGGE FTDSEIVVML GENGTGKTTF IRMLAGKLAP
410 420 430 440 450
DAGNRVPSLN ISYKPQKISP KSTGTVRQLF HEKIRSAYIH PQFITDVMKP
460 470 480 490 500
MLMDSIIDQE IQNLSGGELQ RVAIALCLGK PADVYLIDEP SAYLDSEQRI
510 520 530 540 550
VAAKVIKRFI LHAKKTAFVV EHDFIMATYL ADRVIVFSGT PSVETTANTP
560 570 580 590 600
QPLLSGMNTF LESLEITFRR DPNNFRPRIN KMNSVKDAAQ KKSGQYFFME

DY
Length:602
Mass (Da):67,333
Last modified:April 18, 2012 - v1
Checksum:i9F3C7BE31A7389B4
GO

Genome annotation databases

EnsembliENSCSAVT00000003720; ENSCSAVP00000003664; ENSCSAVG00000002174.

Similar proteinsi

Entry informationi

Entry nameiH2YEB6_CIOSA
AccessioniPrimary (citable) accession number: H2YEB6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: June 7, 2017
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported