H2VAN1 (H2VAN1_TAKRU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSTRUP00000046272

Gene names

Name:

F13A1 (1 of 2) Ensembl ENSTRUP00000046272

Organism

Takifugu rubripes (Japanese pufferfish) (Fugu rubripes) [Reference proteome] Ensembl ENSTRUP00000046272

Taxonomic identifier

31033 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Euteleostei › Neognathi › Neoteleostei › Eurypterygii › Ctenosquamata › Acanthomorpha › Euacanthomorpha › Holacanthopterygii › Acanthopterygii › Euacanthopterygii › Percomorpha › Tetraodontiformes › Tetraodontoidei › Tetradontoidea › Tetraodontidae › Takifugu

Protein attributes

Sequence length	742 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSTRUP00000046272

Ontologies

Keywords
Ligand	Calcium PIRSR PIRSR000459-2 Metal-binding PIRSR PIRSR000459-2
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	peptide cross-linking Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW protein-glutamine gamma-glutamyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	333	1	By similarity PIRSR PIRSR000459-1
	Active site	392	1	By similarity PIRSR PIRSR000459-1
	Active site	415	1	By similarity PIRSR PIRSR000459-1
	Metal binding	455	1	Calcium By similarity PIRSR PIRSR000459-2
	Metal binding	457	1	Calcium By similarity PIRSR PIRSR000459-2
	Metal binding	504	1	Calcium By similarity PIRSR PIRSR000459-2
	Metal binding	509	1	Calcium By similarity PIRSR PIRSR000459-2

Sequences

	Sequence		Length	Mass (Da)
	H2VAN1 [UniParc]. Last modified March 21, 2012. Version 1. Checksum: 75AB03977910945B	FASTA	742	83,267
	10 20 30 40 50 60 MSDPAPVVDP SPAPAAPSGP RPKVTNRGRT AVAVASSNSE STEVPEFESF VALSPRGFPP 70 80 90 100 110 120 LTDYLDIVAV DMMSQSDGVN KQQHRTMFYN SNYLIVRRGQ EFHVKLTFNR PYNPKEDKFA 130 140 150 160 170 180 LEFVIGANPD YSKGTYIPVF PNKERQSRWA GRIADSSNND VTVGITPLAN CIVGKYHMYI 190 200 210 220 230 240 AVMTPFGIRR TRKDPVRDLY ILFNPWSPAD DVFLDDEPER QECVMNEMGI IYHGAYDDIA 250 260 270 280 290 300 ERQWNYGQFN YGVLDACLYI MDRSEMPITN RGDPIKVTRK ASAMLNSRDD DGVLVGNWSG 310 320 330 340 350 360 DYTYGVAPTS WTGSTEILLT YASSRMPVSY AQCWVYAAVF NTFLRCLGIP SRVVTNYYSA 370 380 390 400 410 420 HDNDGNLKTD IILDENGKID RSRTRDSIWN YHCWNECYMT RPDLPFGFGG WQVVDATPQE 430 440 450 460 470 480 TSDGMYRCGP ASVQAIKHGE MCYPFDAAFV FAEVNSDVVF YSRGKDGAMQ PVRVNQTHVG 490 500 510 520 530 540 RMVLTKAPGA TTRRDITSQY KFPEGTSEER TVLEKAEGFG CHREKSRPPE ADVDLVLPTL 550 560 570 580 590 600 EVPVGQDFEL SLEFVNRSDQ RRVVEAYISG NVVFYTGVTS AEFMLRDPTV TMKPNETVKE 610 620 630 640 650 660 TVVVESKKYM KHLVEQANLH FIITGKVKET GQIVTAMKVV ALHNPKLSVK VSGENRVSEE 670 680 690 700 710 720 MMATVEFTNP FSFALADVYI RMEGPGVMMP TYKYYSLIPN GSSLTWTEMF VPQRAGATRV 730 740 FATLDCPALR QVQGEVSLTI KP

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The medaka draft genome and insights into vertebrate genome evolution." Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T., Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A., Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A. , Asakawa S., Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S., Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K., Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y. Nature 447:714-719(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hd-rR Ensembl ENSTRUP00000046272.
[2]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
RefSeq	XP_003975980.1. XM_003975931.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSTRUT00000046428; ENSTRUP00000046272; ENSTRUG00000018071.
GeneID	101071398.
KEGG	tru:101071398.
Phylogenomic databases
GeneTree	ENSGT00690000101887.
KO	K03917.
OMA	GTHVVEA.
Family and domain databases
Gene3D	2.60.40.10. 3 hits.
InterPro	IPR023608. Gln_gamma-glutamylTfrase_euk. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. IPR002931. Transglutaminase-like. IPR008958. Transglutaminase_C. IPR001102. Transglutaminase_N. [Graphical view]
PANTHER	PTHR11590. PTHR11590. 1 hit.
Pfam	PF00927. Transglut_C. 2 hits. PF01841. Transglut_core. 1 hit. PF00868. Transglut_N. 1 hit. [Graphical view]
PIRSF	PIRSF000459. TGM_EBP42. 1 hit.
SMART	SM00460. TGc. 1 hit. [Graphical view]
SUPFAM	SSF81296. Ig_E-set. 1 hit. SSF49309. Transglut_C. 2 hits.
ProtoNet	Search...

Entry information

Entry name

H2VAN1_TAKRU

Accession

Primary (citable) accession number: H2VAN1

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2012
Last sequence update:	March 21, 2012
Last modified:	May 1, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)