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Protein
Submitted name:

T, brachyury homolog b

Gene

t

Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T, brachyury homolog bImported
Gene namesi
Name:tImported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu
Proteomesi
  • UP000005226 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi31033.ENSTRUP00000030268.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585. Eukaryota.
ENOG410XSTS. LUCA.
GeneTreeiENSGT00760000118897.
InParanoidiH2U009.
OMAiAPSCVYI.
OrthoDBiEOG091G05OC.
TreeFamiTF106341.

Family and domain databases

CDDicd00182. TBOX. 1 hit.
Gene3Di2.60.40.820. 1 hit.
InterProiView protein in InterPro
IPR008967. p53-like_TF_DNA-bd.
IPR002070. TF_Brachyury.
IPR001699. TF_T-box.
IPR018186. TF_T-box_CS.
PANTHERiPTHR11267. PTHR11267. 1 hit.
PfamiView protein in Pfam
PF00907. T-box. 1 hit.
PRINTSiPR00938. BRACHYURY.
PR00937. TBOX.
SMARTiView protein in SMART
SM00425. TBOX. 1 hit.
SUPFAMiSSF49417. SSF49417. 1 hit.
PROSITEiView protein in PROSITE
PS01283. TBOX_1. 1 hit.
PS01264. TBOX_2. 1 hit.
PS50252. TBOX_3. 1 hit.

Sequencei

Sequence statusi: Complete.

H2U009-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LDRMAAGECT GKASHYRVDH LLNAVESELQ AGSEKGDPTE KDLTVSLDEI
60 70 80 90 100
ELWQKFKTLT NEMIVTKNGR RMFPVLKANV SGLDPNAMYS ILLDFVSADN
110 120 130 140 150
HRWKYVNGEW VPGGKPEPQT PSCVYIHPDS PNFGAHWMKA AVSFNKVKLT
160 170 180 190 200
NKLNGGGQVM LNSLHKYEPR IHIVRVGGTR KMITSHSFPE TQFIAVTAYQ
210 220 230 240 250
NDEVTALKIK HNPFAKAFLD AKERKDIKDI KEDTGENHQS SYSHWLVGSW
260 270 280 290 300
FIPPSTPHTQ FGTPLSLSPS PGCERYSAVR NHRSAPYTSP YAHRTNSPIG
310 320 330 340 350
YSDNSSACLL PNHDNWSGLH VPTHSSVMSM THTPTSGTNS SQYTSLWSVS
360 370 380 390 400
NSPLTPVSQN GTNMSSQFLR GCSSQYPGLS HSMTVPSCGS PMYDSSVSTE
410 420
VHDAAQFEAS PQGGGLTSVW TPATPPSL
Length:428
Mass (Da):47,008
Last modified:March 21, 2012 - v1
Checksum:i8514D0590496EB58
GO

Genome annotation databases

EnsembliENSTRUT00000030385; ENSTRUP00000030268; ENSTRUG00000011958.

Similar proteinsi

Entry informationi

Entry nameiH2U009_TAKRU
AccessioniPrimary (citable) accession number: H2U009
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: August 30, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported