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Protein
Submitted name:

Mesenchyme homeobox 1

Gene

meox1

Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi170 – 229HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Mesenchyme homeobox 1Imported
Gene namesi
Name:meox1Imported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu
Proteomesi
  • UP000005226 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini168 – 228HomeoboxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili168 – 188Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118940.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
PRINTSiPR00024. HOMEOBOX.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

H2SJ86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQPASSCMR STHPGTPIWG CMRTPHAGVP GANLQYQQAP FSLHQKPEFL
60 70 80 90 100
AYTDFTSFHA AYPRDDRPYH ESQAAYGRAD WQFSPCETRA RATEACPPVA
110 120 130 140 150
APAAVSGGGP ELDSVGGDRL PGSAPGCLEG EYSPQSVASA DSDKKSSNKR
160 170 180 190 200
KRDVTDTQES SFKVDSSCKA RKERTAFTKE QLRELEAEFT HHNYLTRLRR
210 220 230 240 250
YEIAVNLDLT ERQVKVWFQN RRMKWKRVKG GQSSSPNDLE NDDIDSAASP

SSE
Length:253
Mass (Da):28,119
Last modified:March 21, 2012 - v1
Checksum:iB72D555022150E12
GO

Sequence databases

RefSeqiXP_003961086.1. XM_003961037.2.

Genome annotation databases

EnsembliENSTRUT00000012529; ENSTRUP00000012469; ENSTRUG00000005193.
GeneIDi101070108.

Similar proteinsi

Entry informationi

Entry nameiH2SJ86_TAKRU
AccessioniPrimary (citable) accession number: H2SJ86
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: December 20, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported