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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu
ProteomesiUP000005226 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Sequence similaritiesi

Contains fibrinogen C-terminal domain.SAAS annotation

Phylogenomic databases

GeneTreeiENSGT00770000120463.

Family and domain databases

Gene3Di3.90.215.10. 1 hit.
4.10.530.10. 1 hit.
InterProiIPR014716. Fibrinogen_a/b/g_C_1.
IPR014715. Fibrinogen_a/b/g_C_2.
IPR002181. Fibrinogen_a/b/g_C_dom.
IPR012290. Fibrinogen_a/b/g_coil_dom.
IPR020837. Fibrinogen_CS.
[Graphical view]
PfamiPF08702. Fib_alpha. 1 hit.
PF00147. Fibrinogen_C. 1 hit.
[Graphical view]
SMARTiSM00186. FBG. 1 hit.
[Graphical view]
SUPFAMiSSF56496. SSF56496. 1 hit.
PROSITEiPS00514. FIBRINOGEN_C_1. 1 hit.
PS51406. FIBRINOGEN_C_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

H2S9H1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PRLPHFVLCC FCGENHIYFP VMAIFNVGSL DPRGARPVEP STRSEKCASQ
60 70 80 90 100
KEWPFCSDDD WGPKCPSGCR IQGLMDKHDI DLLKKIEKIR NLLDQNKAKF
110 120 130 140 150
RSADQVSEQT YNYLKEKLTV DSGSNNNYYA LAQNLRRSIT DMKIKIDSQL
160 170 180 190 200
KTLAALKDRV RDQVMEMQRL EVDIDIKLRS CKGSCERYSA YQMEVGSYVA
210 220 230 240 250
LEKQLTQLDS QSAQRVESVK TLYVMKSRPL KDDPVDSLLK SKPVDGQQRE
260 270 280 290 300
DMFHEISTVK LILEQEGSSS SPATVSKLPG FDGMSSKTHI STKMAECTKR
310 320 330 340 350
IKTTIIHTKE GPVEQREEVV EGGPECQTAT DFSKGELSSL FPTLTQTSSS
360 370 380 390 400
SSSSSSSSSS SSSSSSSIHP GGAKGSLLGS SKAILVDPFD FGAFTTANAD
410 420 430 440 450
DDLPDLHARS VKSTHVKRNA DYVGKDCVEA HQYHLKGETN GLFQIRPGGT
460 470 480 490 500
QSDQVVEVYC QQEGLMGGWL LVQQRESGAV SFNQSWDEYR SGFGSVDADG
510 520 530 540 550
RGEFWLGNQN LHWLTSQSET LLKVEMEDWE GGAATAEYTL RVGSEEEGFP
560 570 580 590 600
LHVSGYSGEG GDALVLSGSD MAPSLSHDGM KFSTFDKDND KWDQNCAEVY
610 620 630 640 650
GGGWWYNRCQ SANLNGVYYR GSYNPEKNPA VHNGVVWSTF NSSYSLKAVR

MFIRSA
Length:656
Mass (Da):72,664
Last modified:March 21, 2012 - v1
Checksum:i1D447F420869C03A
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Genome annotation databases

EnsembliENSTRUT00000009101; ENSTRUP00000009047; ENSTRUG00000003837.

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSTRUT00000009101; ENSTRUP00000009047; ENSTRUG00000003837.

Phylogenomic databases

GeneTreeiENSGT00770000120463.

Family and domain databases

Gene3Di3.90.215.10. 1 hit.
4.10.530.10. 1 hit.
InterProiIPR014716. Fibrinogen_a/b/g_C_1.
IPR014715. Fibrinogen_a/b/g_C_2.
IPR002181. Fibrinogen_a/b/g_C_dom.
IPR012290. Fibrinogen_a/b/g_coil_dom.
IPR020837. Fibrinogen_CS.
[Graphical view]
PfamiPF08702. Fib_alpha. 1 hit.
PF00147. Fibrinogen_C. 1 hit.
[Graphical view]
SMARTiSM00186. FBG. 1 hit.
[Graphical view]
SUPFAMiSSF56496. SSF56496. 1 hit.
PROSITEiPS00514. FIBRINOGEN_C_1. 1 hit.
PS51406. FIBRINOGEN_C_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Hd-rRImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiH2S9H1_TAKRU
AccessioniPrimary (citable) accession number: H2S9H1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.