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Protein
Submitted name:

Uncharacterized protein

Gene

LOC101073037

Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ChaperoneUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LOC101073037Imported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu
ProteomesiUP000005226 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi31033.ENSTRUP00000003590.

Family & Domainsi

Sequence similaritiesi

Belongs to the TCP-1 chaperonin family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00550000074930.
OrthoDBiEOG7Q5HD3.

Family and domain databases

Gene3Di1.10.560.10. 2 hits.
3.30.260.10. 2 hits.
3.50.7.10. 1 hit.
InterProiIPR012716. Chap_CCT_beta.
IPR017998. Chaperone_TCP-1.
IPR002194. Chaperonin_TCP-1_CS.
IPR002423. Cpn60/TCP-1.
IPR027409. GroEL-like_apical_dom.
IPR027413. GROEL-like_equatorial.
IPR027410. TCP-1-like_intermed.
[Graphical view]
PANTHERiPTHR11353. PTHR11353. 1 hit.
PfamiPF00118. Cpn60_TCP1. 1 hit.
[Graphical view]
PRINTSiPR00304. TCOMPLEXTCP1.
SUPFAMiSSF52029. SSF52029. 1 hit.
TIGRFAMsiTIGR02341. chap_CCT_beta. 1 hit.
PROSITEiPS00750. TCP1_1. 1 hit.
PS00751. TCP1_2. 1 hit.
PS00995. TCP1_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

H2RTX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
EQQLQVQVGV ACCPLEVSLS MAPVNIFKHG ADEERAETAR LSSFVGAIAV
60 70 80 90 100
GDLVKSTLGP KGMDKILLSG GSGGTVTVTN DGATILKAIG VDNPAAKVLV
110 120 130 140 150
DLSKVQDDEV GDGTTSVTVL AAELLREAEL LVSRKIHPQT IISGWRKATQ
160 170 180 190 200
VARDALREAA VDHSNDSARF QEDLLNIART TLSSKLLTHH KEHFARLAVD
210 220 230 240 250
AVIRLKGSGN LDAIHVIKKL GGSLTDSYLD EGFLLDKKIG VNQPKRMENV
260 270 280 290 300
KILIANTGMD TDKIKIFGSR VRVDSTARVA EIELAEKEKM KEKVDRILKH
310 320 330 340 350
GINCFINRQL IYNYPEQLFA QAGIMAIEHA DFSGVERLAL VTGGEITSTF
360 370 380 390 400
DHPELVKLGH CKLIEEVMIG EDTLIHFSGV AMGEACTIVL RGATQQILDE
410 420 430 440 450
AERSLHDALC VLAQTVKEPR TVYGGGCSEM LMAKVVTDLA NRTPGKEAVA
460 470 480 490 500
MESFAKALTM LPTIIADNAG YDSADLVAQL RAAHQENRTT CGLNMSEGTV
510 520 530 540 550
GDMAALGITE SFQVKRQVLL SASEAAEMIL RVDDVIKAAP RSVGHLEPPE

TGAQRPGRR
Length:559
Mass (Da):60,190
Last modified:March 21, 2012 - v1
Checksum:i7D480710FFB67CEB
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Genome annotation databases

EnsembliENSTRUT00000003607; ENSTRUP00000003587; ENSTRUG00000001566.

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi31033.ENSTRUP00000003590.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSTRUT00000003607; ENSTRUP00000003587; ENSTRUG00000001566.

Phylogenomic databases

GeneTreeiENSGT00550000074930.
OrthoDBiEOG7Q5HD3.

Family and domain databases

Gene3Di1.10.560.10. 2 hits.
3.30.260.10. 2 hits.
3.50.7.10. 1 hit.
InterProiIPR012716. Chap_CCT_beta.
IPR017998. Chaperone_TCP-1.
IPR002194. Chaperonin_TCP-1_CS.
IPR002423. Cpn60/TCP-1.
IPR027409. GroEL-like_apical_dom.
IPR027413. GROEL-like_equatorial.
IPR027410. TCP-1-like_intermed.
[Graphical view]
PANTHERiPTHR11353. PTHR11353. 1 hit.
PfamiPF00118. Cpn60_TCP1. 1 hit.
[Graphical view]
PRINTSiPR00304. TCOMPLEXTCP1.
SUPFAMiSSF52029. SSF52029. 1 hit.
TIGRFAMsiTIGR02341. chap_CCT_beta. 1 hit.
PROSITEiPS00750. TCP1_1. 1 hit.
PS00751. TCP1_2. 1 hit.
PS00995. TCP1_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Hd-rRImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiH2RTX0_TAKRU
AccessioniPrimary (citable) accession number: H2RTX0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: June 24, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.