Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

H2RDE9

- H2RDE9_PANTR

UniProt

H2RDE9 - H2RDE9_PANTR

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Uncharacterized protein

Gene

TGM5

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

Cofactori

Binds 1 calcium ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei278 – 2781UniRule annotation
Active sitei278 – 2781 By similarity
Active sitei337 – 3371UniRule annotation
Active sitei337 – 3371 By similarity
Active sitei360 – 3601UniRule annotation
Metal bindingi400 – 4001CalciumUniRule annotation
Metal bindingi402 – 4021CalciumUniRule annotation
Metal bindingi448 – 4481CalciumUniRule annotation
Metal bindingi453 – 4531CalciumUniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

GO - Biological processi

  1. peptide cross-linking Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TGM5Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
ProteomesiUP000002277: Chromosome 15

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000119108.
InParanoidiH2RDE9.
KOiK05622.
OMAiGVLNGNW.
OrthoDBiEOG7WT40M.
TreeFamiTF324278.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

H2RDE9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQGLEVALT DLQSSRNNVQ HHTEEITVDH LLVRRGQAFN LTLYFRNRGF
60 70 80 90 100
QPGLDNIIFV VETGPLPDLA LGTRAVFSLA RHHSPSPWIA WLETNGATST
110 120 130 140 150
EVSLCAPPTA AVGRYLLKIH IDSFQGSVTA YQLGEFILLF NPWCPEDAVY
160 170 180 190 200
LDSEPQRQEY VMNDYGFIYQ GSKNWIRPCP WNYGQFEDKI IDICLKLLDK
210 220 230 240 250
SLHFQTDPAT DCALRGSPVY VSRVVCAMIN SNDDNGVLNG KWSENYTDGA
260 270 280 290 300
NPAEWTGSVA ILKQWNATGC QPVRYGQCWV FAAVMCTVMR CLGIPTRVIT
310 320 330 340 350
NFDSGHDTDG NLIIDEYYDN TGRILGNKKK DTIWNFHVWN ECWMARKDLP
360 370 380 390 400
PGYGGWQVLD ATPQEMSNGI YCCGPASVRA IKEGEVDLNY DTPFVFSMVN
410 420 430 440 450
ADCMSWLVQG GKEQKLHQDT SSVGNFISTK SIQSDERDDI TENYKYEEGS
460 470 480 490 500
LQERQVFLKA LQKLKARSFH GSQRGAELQP SGPTSLSQDS PRSLHTPSLR
510 520 530 540 550
PSDVVQVSLK FKLLDPPNMG QDICFVLLAL NMSSQFKDLK VNLSAQSLLH
560 570 580 590 600
DGSPLSPFWQ DTAFITLSPK EAKTYPCKIS YSQYSQYLST DKLIRISALG
610 620 630 640 650
EEKSSPEKIL VNKIITLSYP SITINVLGAA VVNQPLSIQV IFSNPLSEQV
660 670 680 690 700
EDCVLTVEGS GLFKKQQKVF LGVLKPQHRA SIILETVPFK SGQRQIQANM
710 720
RSNKFKDIKG YRNVYVDFAL
Length:720
Mass (Da):80,663
Last modified:March 21, 2012 - v1
Checksum:i451C0E7BF8DE70A3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACZ03101464 Genomic DNA. No translation available.
AACZ03101465 Genomic DNA. No translation available.
RefSeqiXP_001157235.1. XM_001157235.3.

Genome annotation databases

EnsembliENSPTRT00000067159; ENSPTRP00000058741; ENSPTRG00000006989.
GeneIDi453375.
KEGGiptr:453375.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACZ03101464 Genomic DNA. No translation available.
AACZ03101465 Genomic DNA. No translation available.
RefSeqi XP_001157235.1. XM_001157235.3.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSPTRT00000067159 ; ENSPTRP00000058741 ; ENSPTRG00000006989 .
GeneIDi 453375.
KEGGi ptr:453375.

Organism-specific databases

CTDi 9333.

Phylogenomic databases

GeneTreei ENSGT00760000119108.
InParanoidi H2RDE9.
KOi K05622.
OMAi GVLNGNW.
OrthoDBi EOG7WT40M.
TreeFami TF324278.

Family and domain databases

Gene3Di 2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view ]
PANTHERi PTHR11590. PTHR11590. 1 hit.
Pfami PF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
SMARTi SM00460. TGc. 1 hit.
[Graphical view ]
SUPFAMi SSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Initial sequence of the chimpanzee genome and comparison with the human genome."
    Chimpanzee sequencing and analysis consortium
    Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiH2RDE9_PANTR
AccessioniPrimary (citable) accession number: H2RDE9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3