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H2R4J2

- H2R4J2_PANTR

UniProt

H2R4J2 - H2R4J2_PANTR

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Protein
Submitted name: Uncharacterized protein
Gene
TFDP3
Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. G1/S transition of mitotic cell cycle Source: Ensembl
  2. cellular response to DNA damage stimulus Source: Ensembl
  3. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TFDP3Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
ProteomesiUP000002277: Chromosome X

Subcellular locationi

Nucleus By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. nucleus Source: UniProtKB-SubCell
  3. transcription factor complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the E2F/DP family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000018222.
KOiK09393.
OMAiNIKRRTY.
OrthoDBiEOG7C2R27.
TreeFamiTF314396.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR003316. E2F_TDP.
IPR028315. TFDP3.
IPR014889. Transc_factor_DP_C.
IPR015648. Transcrpt_fac_DP.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR12548. PTHR12548. 1 hit.
PTHR12548:SF13. PTHR12548:SF13. 1 hit.
PfamiPF08781. DP. 1 hit.
PF02319. E2F_TDP. 1 hit.
[Graphical view]
PIRSFiPIRSF009404. Transcription_factor_DP. 1 hit.

Sequencei

Sequence statusi: Complete.

H2R4J2-1 [UniParc]FASTAAdd to Basket

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MAKYVSLTEA NEELKVLIDQ NQTSRPVAVH PSTVNPLGKQ LLPKTFGQSS    50
VNIDQQVVIG MPQRPAASDV PVVGSPNPPS THFASQNQHS YSSPPWARQH 100
NRKGEKNGMG LCRLSMKVWE TVQRKGTTSC QEVVGELVAK FRAASNHASP 150
NESAYDVKNI KRRTYDALNV LMAMNIISRE KKKIKWIGLT TNSAQNCQNL 200
RVERQKRLER IKQKQSELQQ LILQQIAFKN LVLRNQYVEE QVGQRPPPNS 250
VVHMPFIIIS SSKKTVINCR ISNDESEYLF NFNSSIEIHD DTEVLMWMGM 300
AFGLESGSCS AEDLKMARNL VPKALEPYVT EMAQGTSGGV FTTAGSRSNG 350
TWLSASDLTN IAIGLLATSS DGSQYSGSRV ETPAVEEEEE EDNNDDDFSE 400
NDEDD 405
Length:405
Mass (Da):45,007
Last modified:March 21, 2012 - v1
Checksum:i9B57A771D6630331
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACZ03132680 Genomic DNA. No translation available.
RefSeqiXP_003317742.1. XM_003317694.1.

Genome annotation databases

EnsembliENSPTRT00000054890; ENSPTRP00000047258; ENSPTRG00000028201.
GeneIDi473787.
KEGGiptr:473787.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AACZ03132680 Genomic DNA. No translation available.
RefSeqi XP_003317742.1. XM_003317694.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSPTRT00000054890 ; ENSPTRP00000047258 ; ENSPTRG00000028201 .
GeneIDi 473787.
KEGGi ptr:473787.

Organism-specific databases

CTDi 51270.

Phylogenomic databases

GeneTreei ENSGT00390000018222.
KOi K09393.
OMAi NIKRRTY.
OrthoDBi EOG7C2R27.
TreeFami TF314396.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR003316. E2F_TDP.
IPR028315. TFDP3.
IPR014889. Transc_factor_DP_C.
IPR015648. Transcrpt_fac_DP.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
PANTHERi PTHR12548. PTHR12548. 1 hit.
PTHR12548:SF13. PTHR12548:SF13. 1 hit.
Pfami PF08781. DP. 1 hit.
PF02319. E2F_TDP. 1 hit.
[Graphical view ]
PIRSFi PIRSF009404. Transcription_factor_DP. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Initial sequence of the chimpanzee genome and comparison with the human genome."
    Chimpanzee sequencing and analysis consortium
    Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiH2R4J2_PANTR
AccessioniPrimary (citable) accession number: H2R4J2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: February 19, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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