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Protein
Submitted name:

Uncharacterized protein

Gene

TFDP3

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TFDP3Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
ProteomesiUP000002277 Componenti: Chromosome X

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the E2F/DP family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000018222.
InParanoidiH2R4J2.
KOiK09393.
OMAiNIKRRTY.
OrthoDBiEOG7C2R27.
TreeFamiTF314396.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR003316. E2F_WHTH_DNA-bd_dom.
IPR028315. TFDP3.
IPR014889. Transc_factor_DP_C.
IPR015648. Transcrpt_fac_DP.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR12548. PTHR12548. 1 hit.
PTHR12548:SF13. PTHR12548:SF13. 1 hit.
PfamiPF08781. DP. 1 hit.
PF02319. E2F_TDP. 1 hit.
[Graphical view]
PIRSFiPIRSF009404. Transcription_factor_DP. 1 hit.

Sequencei

Sequence statusi: Complete.

H2R4J2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKYVSLTEA NEELKVLIDQ NQTSRPVAVH PSTVNPLGKQ LLPKTFGQSS
60 70 80 90 100
VNIDQQVVIG MPQRPAASDV PVVGSPNPPS THFASQNQHS YSSPPWARQH
110 120 130 140 150
NRKGEKNGMG LCRLSMKVWE TVQRKGTTSC QEVVGELVAK FRAASNHASP
160 170 180 190 200
NESAYDVKNI KRRTYDALNV LMAMNIISRE KKKIKWIGLT TNSAQNCQNL
210 220 230 240 250
RVERQKRLER IKQKQSELQQ LILQQIAFKN LVLRNQYVEE QVGQRPPPNS
260 270 280 290 300
VVHMPFIIIS SSKKTVINCR ISNDESEYLF NFNSSIEIHD DTEVLMWMGM
310 320 330 340 350
AFGLESGSCS AEDLKMARNL VPKALEPYVT EMAQGTSGGV FTTAGSRSNG
360 370 380 390 400
TWLSASDLTN IAIGLLATSS DGSQYSGSRV ETPAVEEEEE EDNNDDDFSE

NDEDD
Length:405
Mass (Da):45,007
Last modified:March 21, 2012 - v1
Checksum:i9B57A771D6630331
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ03132680 Genomic DNA. No translation available.
RefSeqiXP_003317742.1. XM_003317694.2.

Genome annotation databases

EnsembliENSPTRT00000054890; ENSPTRP00000047258; ENSPTRG00000028201.
GeneIDi473787.
KEGGiptr:473787.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ03132680 Genomic DNA. No translation available.
RefSeqiXP_003317742.1. XM_003317694.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000054890; ENSPTRP00000047258; ENSPTRG00000028201.
GeneIDi473787.
KEGGiptr:473787.

Organism-specific databases

CTDi51270.

Phylogenomic databases

GeneTreeiENSGT00390000018222.
InParanoidiH2R4J2.
KOiK09393.
OMAiNIKRRTY.
OrthoDBiEOG7C2R27.
TreeFamiTF314396.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR003316. E2F_WHTH_DNA-bd_dom.
IPR028315. TFDP3.
IPR014889. Transc_factor_DP_C.
IPR015648. Transcrpt_fac_DP.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR12548. PTHR12548. 1 hit.
PTHR12548:SF13. PTHR12548:SF13. 1 hit.
PfamiPF08781. DP. 1 hit.
PF02319. E2F_TDP. 1 hit.
[Graphical view]
PIRSFiPIRSF009404. Transcription_factor_DP. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Initial sequence of the chimpanzee genome and comparison with the human genome."
    Chimpanzee sequencing and analysis consortium
    Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiH2R4J2_PANTR
AccessioniPrimary (citable) accession number: H2R4J2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: April 1, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.