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H2R4J2

- H2R4J2_PANTR

UniProt

H2R4J2 - H2R4J2_PANTR

Protein
Submitted name:

Uncharacterized protein

Gene

TFDP3

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (21 Mar 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. cellular response to DNA damage stimulus Source: Ensembl
    2. G1/S transition of mitotic cell cycle Source: Ensembl
    3. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:TFDP3Imported
    OrganismiPan troglodytes (Chimpanzee)Imported
    Taxonomic identifieri9598 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
    ProteomesiUP000002277: Chromosome X

    Subcellular locationi

    Nucleus UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. nucleus Source: UniProtKB-SubCell
    3. transcription factor complex Source: InterPro

    Keywords - Cellular componenti

    NucleusUniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the E2F/DP family.UniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00390000018222.
    KOiK09393.
    OMAiNIKRRTY.
    OrthoDBiEOG7C2R27.
    TreeFamiTF314396.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR003316. E2F_TDP.
    IPR028315. TFDP3.
    IPR014889. Transc_factor_DP_C.
    IPR015648. Transcrpt_fac_DP.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PANTHERiPTHR12548. PTHR12548. 1 hit.
    PTHR12548:SF13. PTHR12548:SF13. 1 hit.
    PfamiPF08781. DP. 1 hit.
    PF02319. E2F_TDP. 1 hit.
    [Graphical view]
    PIRSFiPIRSF009404. Transcription_factor_DP. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    H2R4J2-1 [UniParc]FASTAAdd to Basket

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    MAKYVSLTEA NEELKVLIDQ NQTSRPVAVH PSTVNPLGKQ LLPKTFGQSS    50
    VNIDQQVVIG MPQRPAASDV PVVGSPNPPS THFASQNQHS YSSPPWARQH 100
    NRKGEKNGMG LCRLSMKVWE TVQRKGTTSC QEVVGELVAK FRAASNHASP 150
    NESAYDVKNI KRRTYDALNV LMAMNIISRE KKKIKWIGLT TNSAQNCQNL 200
    RVERQKRLER IKQKQSELQQ LILQQIAFKN LVLRNQYVEE QVGQRPPPNS 250
    VVHMPFIIIS SSKKTVINCR ISNDESEYLF NFNSSIEIHD DTEVLMWMGM 300
    AFGLESGSCS AEDLKMARNL VPKALEPYVT EMAQGTSGGV FTTAGSRSNG 350
    TWLSASDLTN IAIGLLATSS DGSQYSGSRV ETPAVEEEEE EDNNDDDFSE 400
    NDEDD 405
    Length:405
    Mass (Da):45,007
    Last modified:March 21, 2012 - v1
    Checksum:i9B57A771D6630331
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACZ03132680 Genomic DNA. No translation available.
    RefSeqiXP_003317742.1. XM_003317694.1.

    Genome annotation databases

    EnsembliENSPTRT00000054890; ENSPTRP00000047258; ENSPTRG00000028201.
    GeneIDi473787.
    KEGGiptr:473787.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AACZ03132680 Genomic DNA. No translation available.
    RefSeqi XP_003317742.1. XM_003317694.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSPTRT00000054890 ; ENSPTRP00000047258 ; ENSPTRG00000028201 .
    GeneIDi 473787.
    KEGGi ptr:473787.

    Organism-specific databases

    CTDi 51270.

    Phylogenomic databases

    GeneTreei ENSGT00390000018222.
    KOi K09393.
    OMAi NIKRRTY.
    OrthoDBi EOG7C2R27.
    TreeFami TF314396.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR003316. E2F_TDP.
    IPR028315. TFDP3.
    IPR014889. Transc_factor_DP_C.
    IPR015648. Transcrpt_fac_DP.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    PANTHERi PTHR12548. PTHR12548. 1 hit.
    PTHR12548:SF13. PTHR12548:SF13. 1 hit.
    Pfami PF08781. DP. 1 hit.
    PF02319. E2F_TDP. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF009404. Transcription_factor_DP. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Initial sequence of the chimpanzee genome and comparison with the human genome."
      Chimpanzee sequencing and analysis consortium
      Nature 437:69-87(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiH2R4J2_PANTR
    AccessioniPrimary (citable) accession number: H2R4J2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 21, 2012
    Last sequence update: March 21, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3